Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0526 |
Symbol | ndk |
ID | 7271942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 529205 |
End bp | 529654 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643569173 |
Product | nucleoside diphosphate kinase |
Protein accession | YP_002465622 |
Protein GI | 219851190 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0105] Nucleoside diphosphate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.535144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGGA CCTTTGTGAT GATCAAGCCC GATGGAGTCC AGCGCGGCTT AATCGGGCAG ATCGTCGCCC GGCTTGAGGA CAAGGGGCTG AAGATGGTGG CCGCACGATT TGAGCGGCTC GCTGAGGCGA CGGTGAATGA ACACTACCGT GAGCACATCG AACGGTCGTT CTATCCCTCG CTCAAGCAGT ATATCATGAG CGGTCCCTGT TTCCTGATGG TCTGGGAGGG AAAGAATGCG GCTGCGGTGG TCAGAACGCT GACCGGCGCA ACCAACCCAT CCGAGGCCGC TCCTGGCACT ATCAGGGGCG ATTACGGTCT TGACATCGGT AGGAATGTGA TCCATGCGTC CGACGCTCCT GAGAGCGCCG CACGCGAGAT TGCACTTCAC TTCCCGGGCA CCGGACAGGT CACCTATACA CGGATCGATG AACCGGTCCT GTATGAGTGA
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Protein sequence | MDRTFVMIKP DGVQRGLIGQ IVARLEDKGL KMVAARFERL AEATVNEHYR EHIERSFYPS LKQYIMSGPC FLMVWEGKNA AAVVRTLTGA TNPSEAAPGT IRGDYGLDIG RNVIHASDAP ESAAREIALH FPGTGQVTYT RIDEPVLYE
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