| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0439 |
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| Symbol | |
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| ID | 7270542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 454767 |
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| End bp | 456365 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643569084 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_002465536 |
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| Protein GI | 219851104 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0587451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.906143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATTA TTGTGAACTA TCGAGTACTT GTGAGTGACC CGCTGGCTGA GGAGGGTTTG
ACCATCCTGC GCGATCAGGT CGAGGTGGAT GTGAAGACCG GGCTGACCGA AGATCAGCTG
ATCGCCATCA TCGATCAATA TGACGCTCTG CTGGTGCGGA GCGGAACGCA GGTCACTGCA
AAGGTGATCG AGGCGGGAAC GCATCTGAAG TTCATTGGCC GTGCAGGTGT CGGCGTCGAT
AATATTGATA CTGATGCTGC AACCAGGCAG GGGATCATCG TCGCCAACGC CCCTGAAGGG
AACACGCTCG CTGCCACCGA ACATACGGTT GCGATGATGA TGGCTCTGGC GCGGAACATC
CCGCAGGCCA ACGCTTCGGT CAAACGCCAC GAGTGGAAGA GGTCCAAGTT CACCGGCATC
GAGGTGAACG AGAAGGTGCT CGGGGTCGTT GGCTTCGGGC GGATCGGGAA GGAGGTCGCT
AAGCGGGCGA TAGCGATGAA CATGCGCATC GTCGCCTATG ATCCATTCAT CTCCAAGGAG
AAGGCCGCCG AGATCGGTGT CGAGATCATG ACGATGGCCG AACTCTTCAC CGTTGCAGAT
TTCATCACCG TCCATACTCC GCTGATGAAG GAGACCACCC ATATCATCAA CGATGCTTCG
ATTGCCACAA TGAAGGATGG CGTCAGGATC ATCAACTGTG CCCGGGGCGG GATCATCGAT
GAGCAGGCGC TCTACCGGGG TCTGGTCTCC GGTAAGATCG GTGGGGCCGC GCTCGATGTC
TACGAGCATG AGCCACCGAC CGATTCGCCA TTGATCGAAC TGGACCAGGT GATCATGACA
CCGCACCTCG GGGCGAGCAC CGTTGAGGCG CAGATCAATG TGGCGATCTC GGTCGCCAAG
CAGTGCCTTT CAGTCCTCTC CGGTGGTTCG GCGAGGAGTG CGGTGAACGC ACCGATGATC
CCTGCAGATC AACTGGAGTT CGTCGAGCCG TTCGCGGTGC TGGCAGAGAA GATGGGCAGG
CTGCTGCTGC AGCTGGTCGA AGGCCGGCTC GAAGCGATAG AACTGGTCTA TGGCGGAGAA
TTTGTTGAAA GGAACAGCAA CACGCGTTTC ATCACCAGGA TGGCTCTGAA GGGGATCCTC
GATCGTCTGC TCCACCTGCC GGTGAACATC GTGAACGCAG AGTTCGTCGC CCATGAGCGC
GGGATTGTGG TCAGCCAGAC GGTCACCCGG GAGTCGCAGG GGTTCAAGAA CCTGATCACC
ATCAAGGTCA GGACAGATCT GGGTGAGGAG ACGATCAGTG GTTCGGTCTT CTCAAAGGTT
CGCTCTCGGA TTGTTGCAAT TGGTGGATAT ACGATGGATC TCGATCCGAC CGGTTTCTTG
GTCATCTCCA GGCATCTGGA CAAGCCCGGC GTGATCGGCA GGGCGTCGAC GATCCTCGGG
CACTGTGAGG TGAACATCGC CGGGATGCAG GTCGGTAGGA TCCGGCCAGG TGAGGAGGCG
ATCATGGTTC TGAATGTGGA CAGTGAGGTC TCTGACGAGG CGATGGATGA GATCAGGTCG
ATGCCCGGCA TCTTCAGTGC GAAGTTTGCA CAGATCTGA
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| Protein sequence | MGIIVNYRVL VSDPLAEEGL TILRDQVEVD VKTGLTEDQL IAIIDQYDAL LVRSGTQVTA
KVIEAGTHLK FIGRAGVGVD NIDTDAATRQ GIIVANAPEG NTLAATEHTV AMMMALARNI
PQANASVKRH EWKRSKFTGI EVNEKVLGVV GFGRIGKEVA KRAIAMNMRI VAYDPFISKE
KAAEIGVEIM TMAELFTVAD FITVHTPLMK ETTHIINDAS IATMKDGVRI INCARGGIID
EQALYRGLVS GKIGGAALDV YEHEPPTDSP LIELDQVIMT PHLGASTVEA QINVAISVAK
QCLSVLSGGS ARSAVNAPMI PADQLEFVEP FAVLAEKMGR LLLQLVEGRL EAIELVYGGE
FVERNSNTRF ITRMALKGIL DRLLHLPVNI VNAEFVAHER GIVVSQTVTR ESQGFKNLIT
IKVRTDLGEE TISGSVFSKV RSRIVAIGGY TMDLDPTGFL VISRHLDKPG VIGRASTILG
HCEVNIAGMQ VGRIRPGEEA IMVLNVDSEV SDEAMDEIRS MPGIFSAKFA QI
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