Gene Mpal_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0410 
Symbol 
ID7271436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp428765 
End bp429475 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content59% 
IMG OID643569055 
Productpeptidase S26B, signal peptidase 
Protein accessionYP_002465507 
Protein GI219851075 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02228] signal peptidase I, archaeal type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGAT CAAAGGATAA TCCGGAGAAA CCGTCGCTTC TGACTGCACT CAGGACCAGT 
GAGGAGCAGA AGTTTTCGCT CGCCAGGGAC CTGATCTGGG TGGTCGGAGT CGTGGGTGGA
ATTGCACTGC TGCTCTTCCT GGTCACGGGA ACCTGGCCGG CGGTCGTGAC GATCGAATCC
GAGAGCATGA CCCCGAATAT GAACGTCGGG GACCTGGTGC TGGTCGTGCA GCAGGACCGG
TTCGGAGCGC TGGAGACCCT GGAGGAGGGG GCCCTGAACG GGTATGGAAA GTATAACTCC
CTCCCGAACA ACTCCGGCCA GAAGGTCTAT GGAGATGTGA TCATCTACCG GCCGAACGGG
GATACTGCGA TACATCCGAT CATCCATCGT GCGATCAGGT ACGTGAACGA TTCGGTGGCC
GCTGCCGCCT ATCATGCCTC GCATGGGGGG TATATCACAA AAGGAGACCA CAACACGATC
GAGGACCAGC AGGGCGGATT GGCCGGGATA GGCCAGATCC AGCCGGTCAA ACCCGAATGG
GTCGTTGGAA AGGTGCTCTT TGTGGTTCCG CTGGTCGGCC TGCTCCCGCT CCACCTGCCT
GAAGTGGTGG TGGTGGTGGT GGTGCTGATG CTGGGCTATG AACTCTATCT CAGGTCGCGC
AGGGATGAAT CCGGGGATCA GAAACGAAAG AAAGGAAAGC GGGGACGTTG A
 
Protein sequence
MSGSKDNPEK PSLLTALRTS EEQKFSLARD LIWVVGVVGG IALLLFLVTG TWPAVVTIES 
ESMTPNMNVG DLVLVVQQDR FGALETLEEG ALNGYGKYNS LPNNSGQKVY GDVIIYRPNG
DTAIHPIIHR AIRYVNDSVA AAAYHASHGG YITKGDHNTI EDQQGGLAGI GQIQPVKPEW
VVGKVLFVVP LVGLLPLHLP EVVVVVVVLM LGYELYLRSR RDESGDQKRK KGKRGR