Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0317 |
Symbol | |
ID | 7272618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 345620 |
End bp | 346252 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643568967 |
Product | cyclase family protein |
Protein accession | YP_002465422 |
Protein GI | 219850990 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.555056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.951673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGTG AACAGGCGAT CATCGACCTG ACCAGATCGC TCTCGCCTGA TATGATGGTC TTTCCCGGAG ACCCGGCGGT CAGGTTCACC AGCATCGACG AGGCAGGGGC GACGATCACC TCCCTCTCGC TCTGTTCCCA CAGCGGCACC CATATCGATG CTCCGCACCA TTATTATAAA GACGGCGCTG GCGTCGACCA GATCCCGCTC ACCCACCTGA TCGGACGGTG CAGGGTGATC GACCTGCAGG TTGCAGGAGA TGAGATCACC GCTGCCGACC TGTCAAAGAG GCTCTGCGGG GCCACCCGGG TGCTGATCAG AACCTGGTTC TCAGAGAAAA CCACCTTTGA CCAGCACTAT CCTGCGCTCA GCCGCGAGGC CGCAGCCCTC CTCTGCAGGG AGAAGGTGAT CTGCGTCGGG GTCGATACCC CCTCAGTAGA GCCGTTCACC GGCGATGGAA GCGTTCACCG GAAGCTCCTC GGGGAGGGGA TCGCGATCAT CGAACTGCTG GACCTATCCA GAGTTGCCGG GGGAGAGTAC TGGCTCACCG CCCTTCCGCT CCCCCTCAAA GGACTCGATG GGGCACCGGC GAGGGTCGTC CTGCTCAAGA ATTATCACGG AGAAGGATCA TGA
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Protein sequence | MAGEQAIIDL TRSLSPDMMV FPGDPAVRFT SIDEAGATIT SLSLCSHSGT HIDAPHHYYK DGAGVDQIPL THLIGRCRVI DLQVAGDEIT AADLSKRLCG ATRVLIRTWF SEKTTFDQHY PALSREAAAL LCREKVICVG VDTPSVEPFT GDGSVHRKLL GEGIAIIELL DLSRVAGGEY WLTALPLPLK GLDGAPARVV LLKNYHGEGS
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