Gene Mpal_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0238 
Symbol 
ID7270624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp271251 
End bp271586 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content57% 
IMG OID643568889 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002465345 
Protein GI219850913 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.519233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATG AGCAGCGTGA AGATCTATCA GGACAGATCC TCAAACCAGC TGACCTGGTC 
GGGTACCAAA CCGGGTCGGT CGTCAGCAGG ATGATGGTCT TTAAGAAGAG CGGCACCATC
ACCCTCTTCG CGTTCGACCA GGGGGAGGGG CTCTCCGAGC ATACGGCCCC GTATGACGCG
ATCGTGATGA TTCTTGAGGG GGAGGCCCGG ATTACAATCG AGGGTGAACC GTTCACCCTT
ACCGCCGGGG AGATGATGAT CATGCCGGCA GAGAAGCCCC ATGCCGTCGA GGCGGTCAGC
AGGTTCAAGA TGATGCTGAC GATGATTCAT GCCTGA
 
Protein sequence
MTDEQREDLS GQILKPADLV GYQTGSVVSR MMVFKKSGTI TLFAFDQGEG LSEHTAPYDA 
IVMILEGEAR ITIEGEPFTL TAGEMMIMPA EKPHAVEAVS RFKMMLTMIH A