Gene Mpal_0191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0191 
Symbol 
ID7270962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp220756 
End bp221487 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content41% 
IMG OID643568844 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002465301 
Protein GI219850869 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00113557 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000257741 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTAAGA TTGTATCAGA ATATCGGGAA GAAGCCAGAA AAAAAATATT ACTGGCAGGT 
CTGGAGGTGC TTTATGAGAA AGGCTATTGC AATACAACAA TGGATGAGAT CGCCCGGAGA
CTTGGTGTTA CAAAACCAGC TTTATATAGA TATTTTAAAA CAAAGGATGA GTTGATCATT
GAAAGTGCAA AGGAGAATCA TACAAAATTC CATAGCATGA TCTATGAACC TGACCATGAG
AATTGCCCAT TGGATGCATG GTTATCAATC TTCGAGATGG TCATTGTTCC CGATCCCTGT
GTTCAATCCC TATACTTCGA CATCATCTCG ATGACCTATC GCAAGGAAGA GTTCAGAGCC
TTCTCCATCC AGAGGATGGA AGAGGAGATC ATTAAAACAG CTCGAAAAAT TACAGATTGG
CAGGAGAAAG GTCTAATCGA TTCTGATATT GATCCACGGA GACTCTCGAT CGCAGTGATT
GCACTCTTTA ATGGAATGAG GTTGCAGATC ATGCTTGGTG TAAAAAGAGA GGAATTGTTT
GCTGCATGGA TAGAAAACCT CAAAATGTTG TTTGGTTTTC CGGTTCATGA GAAAAAACCG
ACTGTGTGCT CCTCTTCATG CAAATGGTTC AATCATTGCC AGCGGCCTCC CACTCACAAA
TTGCAGAACA GTGATATCAG TATTCGCAAT AATCATATAA ATCCTACCAA TCCCTTCGAT
CACAGATTTT AG
 
Protein sequence
MTKIVSEYRE EARKKILLAG LEVLYEKGYC NTTMDEIARR LGVTKPALYR YFKTKDELII 
ESAKENHTKF HSMIYEPDHE NCPLDAWLSI FEMVIVPDPC VQSLYFDIIS MTYRKEEFRA
FSIQRMEEEI IKTARKITDW QEKGLIDSDI DPRRLSIAVI ALFNGMRLQI MLGVKREELF
AAWIENLKML FGFPVHEKKP TVCSSSCKWF NHCQRPPTHK LQNSDISIRN NHINPTNPFD
HRF