Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0181 |
Symbol | |
ID | 7270952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 209756 |
End bp | 212008 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643568836 |
Product | (NiFe) hydrogenase maturation protein HypF |
Protein accession | YP_002465293 |
Protein GI | 219850861 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0068] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.542448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.19292 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTGAAG ACTGCGGGAC CATCAGGGTA CGGGGAATCG TGCAGGGTGT CGGCTTCCGC CCGTATGTCT ACGCCGCGGC GGTCGCGCTT AATATCAGAG GAACCGTCAA AAATATCGGC AGTGAAGTCG AGATTCTGGC AATAGGTGAC CATTTTGACC AGTTCGTCGC TGCCATCAGA CATGGACCGA CACGGGCAGT GATCGACAGT GTCACCGTCA CTCCACTGAT CGGGCCAGCC CCTTTCAACA ATTTTTCGAT CCTTACGAGC AGCGAGGGCG CGCGCTCCGG GATGATCCCA CCTGACATTG CGATCTGTGA CGAATGCCTC GCCGACATCA CGAACCCGGA GAGCCGATAT TATCGATACT GGGCCACCTC ATGCGTGAAC TGCGGGCCGC GGTACAGCAT CCTCGACCAG CTCCCCTATG ACCGGCAGCG GACCACGATG GACACGTTCC CGGTCTGCGA GGACTGCAGA GCCGAGTACT CCAACCCGGC CTCCCGCCGA CATCACGCCC AGACGATCGC CTGTCCAACG TGTGGCCCCG GCGTCAGGCT GTACGACAGG AACGGCGATG AGATCGGTGA GGAGGAGCCG ATCGACGAGG CCGCCGCCAG GCTTGCAGCA GGAGAGATCG TCGCCCTGAA GGGGATCGGA GGATTCCACA TCGCCTGCAC CGAGGCAGCT GCACCCCAAT TAAAGGAGCG GCTCGGACGA ACCAAACAAC CGTTTGCCGT GATGGTAACC CCAGCCCGCG CCGATCGGAT CGCGCAGATC AACGAGGGTG AGCAGCAGGC ACTGACCGGG ATCGAACACC CGATCGTGGT GCTGGTGAAA CGCGACAGAA ATGCCCTGAA GGGGATCTCC AATCTCCATA CGATCGGATG TATGCTCCCG TACACCGGCC TCCATCACCT CCTCTTCTCC GCCCTCGCAG ACCATGCAAC CGACCTGCTG GTGATGACCA GCGCAAACAT GCCCGGATAT CCGATGATCA CCGATCTCTC AGAGGCGGTC ACCCATCTCT CCGGGGTCGC TGACTGCTTC CTCTCCCATG ACCGGAGGAT CGTGAACCGG TGCGACGACT CGGTGATCAG GGACGGGTAC CTGATCAGAC TCTCGCGGGG GTATGCACCG CTGCGAACTA GGATCCCGCT CGGCGATCGA TGTATCCTTG GGGTCGGGGC CGAGCTGAAC GTGAACGCGA CGATCTACCG GGATGGGTTC GCAATCACCT CCCCCCATAT CGGGAACGTC AGAAACCCAA AGACCCTGCA GTACCTGGAG CAGACCATCG AGACCCTGGG CGGGCTGCTC GGGGCAGAGT ACGATCTGAT CGTCCATGAC CTCCACCCCC GGTTCCTCTC GACCAGGTTC GCCGAACGGC TCGGAGACGA ACTCGGAGCC GAGGTGATCG CCGTCCAGCA CCACCGGGCC CATATCGCGG CCACCACCCA GGAGCCCTGC GTCGGAATCG CCATCGACGG GGTCGGGTAC GGGGACGACC GGACGATCTG GGGCGGCGAG ATCTTTGCCG GCGAGACCCT GCATCTGGAT AGGGTCGGTC ACCTGGAGTC GGTGTCGATG CCGGGCGGGG ACCTGGCCAC CCGGTTCCCG GAACGGATGC TCTACGGGCT GCTGCCGGAC GACACAGTCC TTGACCTGCT CGACGAACGG GGTTGGTCAG AGGTCGAGCG CAGAGCCCTG CAGCAGCAGG TGGCAAAGCA GATCAACACC CCGCTCACCT CCTCCACCGG CCGGGTGCTG GATGCGATGG CTGCGCTCCT CGGGATCTGC AGGGAACGGA CCTATGATGG CGAGCCGGCG ATGGTCCTCG AATCGGTGGC AGCCGAGGGG ACTCCGCATT CCTGGGATCT CGAGTATCGG ACGGAAGACG GGGCTGAAGT CCTCTCCACG AGGGCACTGG TCAGGAAGGC TTTCAATGAG TACCGAAGCC TCGACCGGCC AGGGACGAGG AGCGGGCAGC AGCAGCGGGC TGACCTGGCG GCCTCGATCC AGTTCAACCT GGCCAGGGGA ATCGCCGGGA TGGCAGTCAG GGCTGCAGAC GAACAGGGAC TTTCGGTGGT GGCCCTCAGC GGCGGGGTCG CAATCAATGC GATGATCCGC GAGACGATCC ATACCATCGT CTGCAAGCAT GGGCTGACCT TCCGAATGAA TGATCGCTAC CCGCCCGGAG ACGGCTGCGT CTCGTTCGGG CAGGTTGTGT ACGGCGGAAA GAAGATGGAC TGA
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Protein sequence | MSEDCGTIRV RGIVQGVGFR PYVYAAAVAL NIRGTVKNIG SEVEILAIGD HFDQFVAAIR HGPTRAVIDS VTVTPLIGPA PFNNFSILTS SEGARSGMIP PDIAICDECL ADITNPESRY YRYWATSCVN CGPRYSILDQ LPYDRQRTTM DTFPVCEDCR AEYSNPASRR HHAQTIACPT CGPGVRLYDR NGDEIGEEEP IDEAAARLAA GEIVALKGIG GFHIACTEAA APQLKERLGR TKQPFAVMVT PARADRIAQI NEGEQQALTG IEHPIVVLVK RDRNALKGIS NLHTIGCMLP YTGLHHLLFS ALADHATDLL VMTSANMPGY PMITDLSEAV THLSGVADCF LSHDRRIVNR CDDSVIRDGY LIRLSRGYAP LRTRIPLGDR CILGVGAELN VNATIYRDGF AITSPHIGNV RNPKTLQYLE QTIETLGGLL GAEYDLIVHD LHPRFLSTRF AERLGDELGA EVIAVQHHRA HIAATTQEPC VGIAIDGVGY GDDRTIWGGE IFAGETLHLD RVGHLESVSM PGGDLATRFP ERMLYGLLPD DTVLDLLDER GWSEVERRAL QQQVAKQINT PLTSSTGRVL DAMAALLGIC RERTYDGEPA MVLESVAAEG TPHSWDLEYR TEDGAEVLST RALVRKAFNE YRSLDRPGTR SGQQQRADLA ASIQFNLARG IAGMAVRAAD EQGLSVVALS GGVAINAMIR ETIHTIVCKH GLTFRMNDRY PPGDGCVSFG QVVYGGKKMD
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