| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0144 |
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| Symbol | |
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| ID | 7270914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 169487 |
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| End bp | 171298 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643568802 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_002465260 |
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| Protein GI | 219850828 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0287244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00361496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCACCTGC TCGCTCAGAC CCTGACCATC GCCCGCTGGG AGGTGAAGCG ATCGCTGACG
ATGATGAGAA GGGATGTGCT TCCCCTCTCA ATCGTGCTCT TCATCCTGCT GATCGCCGTC
ACCGGGTTCG CCGCCCAGAA CGGAATGCAC CTGCAGGACA AACTGTACAC GATCGGGGTC
GACGACCCCG TGCTGGCCAG TGTCTTCGCC GGGGATACCC GGTTCACAGT TGCAACGCTG
CCGACCGATA CCGTGCTGAC GGGCACCGGG GGGTACGACC TGGTCGTCAC CCACGGGCAG
GCGACCTCAG CCCCGACTCA GCGTGGCCGG GCTGCGCTGC TGACCCTGTC CCGGGATTAC
AGTCGGTACG TGAACGCAGT CTACACCAGT CAGCCGGACC TCTTCGCCGC ATACCCGCTC
TGGATCGACC TGCAGAATGT GAAGAGTGAA CTCGACTTTG TCGCCACCCA GTCCGGGCAG
CAGGTGGCTG CACCACCCCC CGCAGGTCAG CCGGTGCCTG AAGGGACCGT GGTGCAGGTC
GCCACCCCGC CGGCAGCGAT CGATATCGCC CCGGACCAGC TTCGGCAGCA GGTGGCCAGC
AGTTCCGACC AGAACGATCA GGTGGCCAGG TACTCGAACA TCCTCACATC GAAGGGAGTG
CAGCAGGAGG CGAACGTCAA GATACCCTCG CAGATCTCCC CGCCCCTGCC GTTCGACTCG
ATCATCCTGA TCTTCGTCTT CATCTTCCCG CTGTACTTCA CCTCCCAGTT CTTCATGATG
AGCATCATGA ACGAACGGGT GGAGCGGCGG GGGGAACCGC TCCTCTCGAC ACCGATCCAC
CCGGTGGCGA TCATCCTTGG CAAGGCGCTG CCCTACCTGC TCCTGATGTT CCTGGCGGCG
ACCGTGCTCC TGCTCATACT GCACGCCTCC CTCGTGATCC TGGCCGCCCT CTTCCCGGTG
ATCCTCTTCT TCCTGGCCAG CGCGATGATC ATCGGGATGA TCGCACGGAG TTACAAGGAA
CTCTCGTTCA TCTCAATCTT CTTCTCGACG ATCGCGACGT CATACCTCTT CTTCCCCTCG
ATCTTCGCAA ACGTCCATGT CGTCTCGCTC ATTTCGCCGC TGACGCTGAT CGTCCTCTCG
ATGCAGGGGG ATGGGTTCAC GCTGGCAGAC TACGGCTACT CGACGATCCT CTTCTACCTG
ACCAGCCTGG TCCTCTTCTA CATCGGGGTC GTGAACTTCG GCGAGGAGCA GCTCTTCTCG
CAGCACCGGT TGGTCCCGCG GGTCAGAGAG TTCATCGGAA CCGCACTCTC AAAGAAACGG
CCGTTCCTCT CGCTCTTCCT GCTGAACCTG CTCCTGATCC CGTTCGTCTT CATGGCGCAG
ATGATGACGC TCGTCCTCTT CTTCAACCTC CCGATGCCGT ACTCGCTGGT GCTGTTGATC
ATCGCCGCGG CCTTCATCGA GGAACTGGTA AAATCGATCG GGCTCGTGGC GTTCCGGACC
GTCCTCCCGG ACCTCTTCAC CTGGAGACGG CTCATCCCGG CCGCGGCTGT CACAGCCATC
GGCTTCCTGG TCGGCGAGAA ACTGCTGCTG CTGGTGACGC TGACCCAGAT CACCGAGTCG
GTCTTCGGGT CGGTCCTCTT CACCTCGCTG CAGGTGCTCT GGATGCCGTT TCTCCTCCAC
TTCGCAGGGG TGTTGATCGT CGGAGTATCG CTGAAGGTGG GTGGAAAACG TGGGTACATC
CCCGGACTGG TGCTGGCGAC CGCAGTCCAT ACCCTCTATA ACCTGGTACT GATCATGGGG
TGGTCACTGT GA
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| Protein sequence | MHLLAQTLTI ARWEVKRSLT MMRRDVLPLS IVLFILLIAV TGFAAQNGMH LQDKLYTIGV
DDPVLASVFA GDTRFTVATL PTDTVLTGTG GYDLVVTHGQ ATSAPTQRGR AALLTLSRDY
SRYVNAVYTS QPDLFAAYPL WIDLQNVKSE LDFVATQSGQ QVAAPPPAGQ PVPEGTVVQV
ATPPAAIDIA PDQLRQQVAS SSDQNDQVAR YSNILTSKGV QQEANVKIPS QISPPLPFDS
IILIFVFIFP LYFTSQFFMM SIMNERVERR GEPLLSTPIH PVAIILGKAL PYLLLMFLAA
TVLLLILHAS LVILAALFPV ILFFLASAMI IGMIARSYKE LSFISIFFST IATSYLFFPS
IFANVHVVSL ISPLTLIVLS MQGDGFTLAD YGYSTILFYL TSLVLFYIGV VNFGEEQLFS
QHRLVPRVRE FIGTALSKKR PFLSLFLLNL LLIPFVFMAQ MMTLVLFFNL PMPYSLVLLI
IAAAFIEELV KSIGLVAFRT VLPDLFTWRR LIPAAAVTAI GFLVGEKLLL LVTLTQITES
VFGSVLFTSL QVLWMPFLLH FAGVLIVGVS LKVGGKRGYI PGLVLATAVH TLYNLVLIMG
WSL
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