Gene Mpal_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0138 
Symbol 
ID7270908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp163557 
End bp163865 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content61% 
IMG OID643568796 
Producttranslation initiation factor eIF-1A 
Protein accessionYP_002465254 
Protein GI219850822 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00523] eukaryotic/archaeal initiation factor 1A 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0466925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGGA AGAAGCCGGC TCCACCTCAA GGTGAGGAGA TCGTCAGGGC CAGGCTGCCT 
CAGAAACGGA ATAGTGAGAT CTTTGGACGA GCCGAGATGA TGATGGGAGC CAACCATATC
CGCGTTCGGG GGGAGGACGG GGTGACCAGG ACTGGGCGGA TCAAGGGCAA GATCAAGAAG
AAGGTCTGGA TCCGCGAGGG TGACATCCTG GTCGTCGTCC CCTGGTCGTT TCAGGACGAT
AAGTGCGACA TCGTCTACCG GTACACCGCT CCTCAGGTGG ACTGGCTCCG CCGGACCGGG
CACCTCTGA
 
Protein sequence
MTGKKPAPPQ GEEIVRARLP QKRNSEIFGR AEMMMGANHI RVRGEDGVTR TGRIKGKIKK 
KVWIREGDIL VVVPWSFQDD KCDIVYRYTA PQVDWLRRTG HL