| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0085 |
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| Symbol | |
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| ID | 7272255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 95326 |
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| End bp | 95871 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643568743 |
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| Product | coenzyme F420-reducing hydrogenase delta subunit |
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| Protein accession | YP_002465202 |
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| Protein GI | 219850770 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00130] coenzyme F420-reducing hydrogenase delta subunit (putative coenzyme F420 hydrogenase processing subunit). |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0501687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0549727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTTT CTGAGATCGT GGTGGTCGGT TGTGGCAATC CCCTCTTTGC GGATGACGGG
TACGGACCCG CTGTGATAGA GGCATTGCAG AAACTACCGC TTCCTGAGAA CGTCAAGGTG
ATCGATGTCG GCCTGGGAGG TCCGCACTTC GTCTTCACGC TTCTCGATGA TACGGTCACC
AAGAAACTGG TGATCGTCGA TATTGCAGAC TTTGGTGCCG CGCCAGGTTC CCTTACCAAG
TTAAGGGTTG AAGACCTGCC GCCGGGCAGT TATCGTGACG CTCATTCGTG GGATCTCGCC
GAACCACTGC AGCGCATCAA GGATACAATA GACATCACGG TCATTGGATG CCAGCCAAAA
CGCGTTACCG CGCCCGAATT TGAGATTGGG CTCACTGAAG AGGTTCGAAA GGCAATACCC
AGAACGGTAG AGTTAATACT CCAGGAGGTT GGAGTCGATC ATGGGACTGC TATCAAACAT
CTTCAATATC TTCAAGAAGA AGAACGTCAC GGTGGAGACC CCGCAGCAGA CTGCACCAGC
ACCTGA
|
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| Protein sequence | MLFSEIVVVG CGNPLFADDG YGPAVIEALQ KLPLPENVKV IDVGLGGPHF VFTLLDDTVT
KKLVIVDIAD FGAAPGSLTK LRVEDLPPGS YRDAHSWDLA EPLQRIKDTI DITVIGCQPK
RVTAPEFEIG LTEEVRKAIP RTVELILQEV GVDHGTAIKH LQYLQEEERH GGDPAADCTS
T
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