| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0078 |
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| Symbol | |
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| ID | 7272248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 81844 |
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| End bp | 85548 |
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| Gene Length | 3705 bp |
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| Protein Length | 1234 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643568736 |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_002465195 |
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| Protein GI | 219850763 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.511687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAGTG AGATTCTGTG CTGTTATATC GTGCTTGCCA TGCTGCTGGG AGGGTCACTC
CTGGTCATCC ATGCAGATGC GACCGTGAAT ATCCTGCCGC TTGGCGATTC GATCACGCGG
GGCGGGACCA CCGCTGACTC TCCGTATCCC AGTTATCGAT ACCTGCTCTG GAACTACCTC
AAGACCGGCG GCTACGATGT CAACTTCATC GGCTCCACGA CTTTTCCCAC CTTCAGCTCG
TTCTCGTTCG ATCAGAACCA TGAAGGGCAT GGGGGGTATA CCACCGGTAT GGAACTGGCG
GGGGACTCCT CCGATGATCC CTCGGCCAAA CTCTCCAACT GGCTGAAACT CTATACCCCT
GACATCGTCC TCCTCCACAT CGGGACCAAC GATGTGATCC AGCAGGTGCC GCTTGCGACG
CGGCTGAGCA ATGACGCTCA GATCATCGAT ACGCTCAGGG CGGACAATCC GAACGTGAAG
ATCCTGATAG CGCAGATCAT ACCGACCAGC GATTCGTTCA GGAACACGAA CTCCCAGCTG
ATCGCTTATA ATAACGCGCT TCCGGCTCTG GCGGCCCAGA AGAGCACGGC CCAATCGCCG
GTGATTGTGG TCGACCAGTA CACCGGGTAT AACGGATTTT CGGACAACCA GTACGACGGG
ATCCACCCAC AGACCTCTGG TGAGAAGAAG ATGGCCGACC GTTGGTATGC CGCACTGGTA
CCGCTGCTCA GCGGCGGTAC AACAGTCGAA CCGACACCGG TACCAACATC TGCGCCATGG
GACTCGCCAC AGGCGATCCC TGGTTCGATC CAGGCAACTG ACTATGCTTC CGGTGGCGAG
GGTGTCGCTT ACCATGACAC GACCACCGGC AACCAGGGTG GTGCCTACCG GAATGACGAC
GTGGATATCG AGTACTCTTC GGTGGAGCAG GAGTTTGTGG TCGCATATAT CCGGTCAGGC
GAGTGGCTCA CCTACGATGT GAACATCGCC TCGGGCGGGA TCTATACCGT CAACTTCAGG
GTCTCCTCCC CCAACACCGG GAGTACCATC GATCTGGAGG TCGACGGGTC CGAGGTGACG
ATGATCCAGG TGCCCAACAC CGGCTCCTTT GATACCTACA CCGCGGTACA GCGGCCGGTC
TACCTGCCGA GCGGCCATCA CACCCTGAAA CTCGACTTCA GTGGATCCTC CAATGTGAAC
TATCTGAAGT TCACGACCGG GATGCCGACG CCGGTGCCGA CTGGGACCAC AGTCTCACCG
ACACCGACCG GCAGCCAGAC GATCACACCG ACTGTGACTC CAACCGGGGT GGAGCGGGCC
TATGTTTCGC ATACCTTCCC CTGCAAAGTC GAAGCTGAGG ACTATGACCT GGGTGGCGAA
GGGATTGCGT ACCATGACAC GACGCCCGGC AATCTAGGCG GTGAATATCG AAGTGACGAT
GTCGATATCG AGGCGATGTC CGGTGGCGGA AGCAATGTCG GGTATATCAA GAATGGAGAA
TGGCTGGCCT ATACGGTGTC CGTCCCAGTC ACCAGAACCT ACGTCGCGAC CTTCAAATCG
AGTAGCTGGG CTCCGGGCCG TTCGATCCTT GTGCAGGTGG ACGGGACACC GGTCACAGCG
GTCGGCGTTC CAAACACCAA TTCAAGCAAC GTCTATGACT CCGCTCAGGT CGCGCTTCCG
ATGACACAGG GAATGCACCG CATCACATTG ACCTTCAATG GGGACTGTCA GAACCTGGAC
TGGTTCGATG TGACCAACGA CATGCCCACG ACCGTCACGA CGCCGGTGCC GACCACGGTA
GTGACGACGG TACCGACCAC CATAGTAACG ACGAAACCAA CCACCACCAC GACCACGGTG
CCGACGACTG CCCCTACAAC GGTCGTGACT ACGGTGAAGC CGACCCAGAC CTCTCTCCCG
TACGTGGCTC ACCGACCACC GATCAGGGTC GAGGCCGAGG ATTATGACCA GGGTGGCGAA
GGGGTCGCAT ATCATGATAC GACGCTCGGC AACCTTGGTG GGCAGTACCG GCAGGACGAC
GTGGACATCG AGACGATAGC AGCCGGCGGG TACGATGTCG GATATATCAA GGACGGAGAA
TGGCTGACCT ATACGATCGA TGCGCCCTCC ACCTCAGCGT ACACCGCAGT CTTCCGGATG
GCGTCATGGG GTGCCGGCCG ATCGATCGGT GTCAGTGTCG ACGGCGTTCA GGTCACGACG
GTACCGGTTG CCATGACCGG GTCGTACAGC ACGTTCACAC TCTCTGCGGC TTCGTTTACG
ATGACCCAGG GGACCCATAA GGTCAGGTTG ACCTTCAACG GAGACAGCCA GAACCTGGAC
TACTTCGATC TGATCCCTGG AAACTATGCG CCGACGACAA CCACCGTCAC GCCCGTCCCC
ACAACCGTGA TGACCACAGC GACGGTTACG ACGACGGCGG CGACCACGAC AGTGCCGACG
ACGACACCAA CCACTACTGT CCCCACGACG GTCGTGACCA CAGGTACCAC GACGGTTACG
ACGACAGCGG CGACCACGAC GGTGCCGACC ACTGCAGTAA CAACGGTGAC AACGACACCA
GCCCCGTCAG GCACCGTCTG GCAGATCCCG ACCCATATCG AGGCCGAGGA TTATGACCAG
GGTGGCGAAG GGGTCGCATA CCATGATACG ACGCTCGGCA ACCTTGGCGG GCAGTACAGA
CAGGACGATG TGGATATCGA GGCTATATCC GGCGGCGGGT ACGATGTCTG CTACATCAGG
GACGGTGAAT GGCTGCGGTA TCATATTACG GTCCAGAACA CCGGCATTTA CACCGCGACC
TTCAGGGTCG GAAGCTGGAA CCAGGGGAGG GCGATCACCA TCGGGGTCGA CGGTGTTGGG
GTAGCCGTGG CCGCGGTCCC GAACACCGGT TCGAGCAGTG CCTATACCAC CACTGCGGTG
GCGGTTCCAC TGGCTGCCGG GGATCATATG CTCACCCTGA CCTTCAACGG TGATGGCCAG
AATCTGGACT GGTTCACACT GGGTAATGGT GTGATCCAGA CGACGACACC GACGACTGTG
GCGCCGACGA CTGCCCCCAC GACGGTGCCT ACCACCGTGG TGACGACCGT GAAACCCACG
ACCACGGTGA CGACCGTCAC CCCGACGACC ATGGCGACCA CTGTGAAACC CACGACGGTG
GTCACGACCA CTATTTCCCC GACGATCCCG ACGATTCCAG TCAGCACCAC GGCGACGACC
CTCCCTCTCC CCGATACCAA GGCCTACACG AGTCTCTCTC TTCCGGGTCG GCTGCAGGCC
GAGAACTATG ACAACGGCGG CGAAGGGGTT GGCTACCATG ATACCACCCC TAGCAACCAG
GGCGGTGCCT ATCGGAACGA TGATGCTGAC GTCGAAAGCC TGATCGACAA CAGCGGATAC
GATGTCTGCT GGATCCGGGA TGGCGAATGG CTGAAGTACA CCGTGACCGT CCAGCAGAGC
AGAACGTATG GGGCCGCCTT CAGGGTTGCC TCCCCACAGG CCGGGGGGCA GGTCGAGCTG
AAGGTCGACG GTACAAGCGA GGTGACCGTC AACGTCCCGA ACACCGGGTC GTTCGACATC
TACCAGTCGA TCGGCACCCA GGTACCGCTG ACCGCTGGAC AGCATACGAT CACCCTGGCC
TTCCATGGAT CACGGATGAA CGTCGACTAC GTTGACTTCG TCTGA
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| Protein sequence | MRSEILCCYI VLAMLLGGSL LVIHADATVN ILPLGDSITR GGTTADSPYP SYRYLLWNYL
KTGGYDVNFI GSTTFPTFSS FSFDQNHEGH GGYTTGMELA GDSSDDPSAK LSNWLKLYTP
DIVLLHIGTN DVIQQVPLAT RLSNDAQIID TLRADNPNVK ILIAQIIPTS DSFRNTNSQL
IAYNNALPAL AAQKSTAQSP VIVVDQYTGY NGFSDNQYDG IHPQTSGEKK MADRWYAALV
PLLSGGTTVE PTPVPTSAPW DSPQAIPGSI QATDYASGGE GVAYHDTTTG NQGGAYRNDD
VDIEYSSVEQ EFVVAYIRSG EWLTYDVNIA SGGIYTVNFR VSSPNTGSTI DLEVDGSEVT
MIQVPNTGSF DTYTAVQRPV YLPSGHHTLK LDFSGSSNVN YLKFTTGMPT PVPTGTTVSP
TPTGSQTITP TVTPTGVERA YVSHTFPCKV EAEDYDLGGE GIAYHDTTPG NLGGEYRSDD
VDIEAMSGGG SNVGYIKNGE WLAYTVSVPV TRTYVATFKS SSWAPGRSIL VQVDGTPVTA
VGVPNTNSSN VYDSAQVALP MTQGMHRITL TFNGDCQNLD WFDVTNDMPT TVTTPVPTTV
VTTVPTTIVT TKPTTTTTTV PTTAPTTVVT TVKPTQTSLP YVAHRPPIRV EAEDYDQGGE
GVAYHDTTLG NLGGQYRQDD VDIETIAAGG YDVGYIKDGE WLTYTIDAPS TSAYTAVFRM
ASWGAGRSIG VSVDGVQVTT VPVAMTGSYS TFTLSAASFT MTQGTHKVRL TFNGDSQNLD
YFDLIPGNYA PTTTTVTPVP TTVMTTATVT TTAATTTVPT TTPTTTVPTT VVTTGTTTVT
TTAATTTVPT TAVTTVTTTP APSGTVWQIP THIEAEDYDQ GGEGVAYHDT TLGNLGGQYR
QDDVDIEAIS GGGYDVCYIR DGEWLRYHIT VQNTGIYTAT FRVGSWNQGR AITIGVDGVG
VAVAAVPNTG SSSAYTTTAV AVPLAAGDHM LTLTFNGDGQ NLDWFTLGNG VIQTTTPTTV
APTTAPTTVP TTVVTTVKPT TTVTTVTPTT MATTVKPTTV VTTTISPTIP TIPVSTTATT
LPLPDTKAYT SLSLPGRLQA ENYDNGGEGV GYHDTTPSNQ GGAYRNDDAD VESLIDNSGY
DVCWIRDGEW LKYTVTVQQS RTYGAAFRVA SPQAGGQVEL KVDGTSEVTV NVPNTGSFDI
YQSIGTQVPL TAGQHTITLA FHGSRMNVDY VDFV
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