| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0065 |
|---|
| Symbol | |
|---|
| ID | 7272234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 69936 |
|---|
| End bp | 70529 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643568722 |
|---|
| Product | CDP-alcohol phosphatidyltransferase |
|---|
| Protein accession | YP_002465182 |
|---|
| Protein GI | 219850750 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.364844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCG ACTCCTACCG CCCGCATGTG GCCCGTTTCT TCCCCCCGTT CGTCGCCCTG
GCGCAGAGAC TGCACCTGAC CCCCAACGCC CTGACGATCC TCTCGTTCTT TGCGGCCGGC
GGAGCGGGGG TCGCATTCTA TAAAGGTTCA CTCGGCCTTG GAGTGGTGAT GGTCGCCCTG
AACGCCGTCT TCGATGCGCT GGACGGGGCG GTGGCCAGGG CCGGTAGCCT TCAGTCCAAG
AAAGGGGACT TCCTCGACCA CGCCGTCGAC CGGTACGCCG ACATCTTCAT CATCACCGGT
ATCTTCGCGG GCGGTGCGGT CTCCTGGCAG ATCGGGGTCT TCGCCCTGAC CGGGGTGCTG
ATGTCGTCAT ACTTAGGTAC CCAGGCCCAG GCCGTCGGAG TCGGGCGGTA CTACGGCGGG
CTGCTCGGCC GGGCCGACCG GCTCGTGCTG GTGATCCTGG CCGGGATCCT CGGTATGATC
TTCCCGGGTC AGTACTTTGG GCTGACCCAG CTCGGCTGGG TACTCGGCCT CTTTGGGGTG
CTCGGTCACT ACACTGCCTA CCAACGGTTC CGGTTCGTCT GGAAGCAACT GTGA
|
|---|
| Protein sequence | MTLDSYRPHV ARFFPPFVAL AQRLHLTPNA LTILSFFAAG GAGVAFYKGS LGLGVVMVAL
NAVFDALDGA VARAGSLQSK KGDFLDHAVD RYADIFIITG IFAGGAVSWQ IGVFALTGVL
MSSYLGTQAQ AVGVGRYYGG LLGRADRLVL VILAGILGMI FPGQYFGLTQ LGWVLGLFGV
LGHYTAYQRF RFVWKQL
|
|---|
| |