| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0063 |
|---|
| Symbol | |
|---|
| ID | 7272232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 68089 |
|---|
| End bp | 68748 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643568720 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002465180 |
|---|
| Protein GI | 219850748 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2339] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATCA TCCTTGTAGC CGCCTACCTT CTGCCTATCC TTTTTCTTAT AGCGTTTATA
GGCTACCGTG GTAAAAAATT CATGATCTAT CTCCTCTGGG GTATTGTAGC AACCATACCG
GTAAACCTTC TTTTTCCGAT ATTTTCCCCT GCATTTCCCA CACTCCCCTA CTCCCTTACG
GTATCCCCTC TCGTGGAAGA ATTTTTCAAG GCACTTCCGA TCATCATTCC AGTTATCATG
GGTGTAAAGA ACAGCGACGA AGATCTGCTG ACCTATGCGA TGGCTGCAGG CATTGGATTC
TCCATCATTG AAACCTGGAC TGTCATCGAT CCCAGTGCCC TCCAGCTCAC GCTCGTACCT
GTTTTGAGTA TCCTCGCCCG GTCGTTTTCA ACCTCCCTGA TGCATGGGTG CACATGCGGG
ATCATCGGGT ATGGCATTGT CCTTATCAAA AATTTTGACC GTGGAGCGCT TCCGATCCTC
TTGTTCGGGT TTTATACGCT TGCCGTAACA ATCCACGCGA TCTTCAACCT GTTATCAGAA
CATTACCAGT TGATCGGCAC CATCATCGAT CTCATCTTCC CGGTGGTCTT GTTCTTCTTT
CTGCTCACCT GCTACCATGT GAACCTGCCA ATCCTGTTTA AAAAGACTGA TTCCCTGTAA
|
|---|
| Protein sequence | MEIILVAAYL LPILFLIAFI GYRGKKFMIY LLWGIVATIP VNLLFPIFSP AFPTLPYSLT
VSPLVEEFFK ALPIIIPVIM GVKNSDEDLL TYAMAAGIGF SIIETWTVID PSALQLTLVP
VLSILARSFS TSLMHGCTCG IIGYGIVLIK NFDRGALPIL LFGFYTLAVT IHAIFNLLSE
HYQLIGTIID LIFPVVLFFF LLTCYHVNLP ILFKKTDSL
|
|---|
| |