Gene Mpal_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0029 
Symbol 
ID7270141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp27009 
End bp27944 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content63% 
IMG OID643568688 
Productputative deoxyhypusine synthase 
Protein accessionYP_002465148 
Protein GI219850716 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1899] Deoxyhypusine synthase 
TIGRFAM ID[TIGR00321] deoxyhypusine synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.55506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGAT GCAATGAGCC GGTCAAACAG GCGCACCTCA CAGCAGGGAT GAGCGTCGGG 
GCGCTCGTCG CCGCACTGAG AGGGGCTGGG GCGTACAACG GGGGATCGCT GGCGGAAGCG
GTGACGATCT ATCGCAGGAT GCTTGAGGAC ACCGAGACGA CCAAGTTCTT CGGCCTCGCC
GGAGCGATGG TCCCGGCAGG GATGGGCGGG ATCGTATCGG ACCTGATCCG GGACGGGCAT
ATCGACCTGC TCGTCTCCAC CGGTGCGAAC CTGACCCACG ACGTGATCGA GGCGATCGGC
TGCCACCACT ACCATGGCAC GGCCGACTGC TCGGATGTCG AACTCCTCCA CGAAGAGATC
AACCGTATCT ACGATGTCTT CCTCCCAAAC GAGGCCTTCA TCCACTTCGA GGAGTTCATG
CAGGAGGTCT ACGGGGATCT CGAGGAGGGC TCGGTGATCT CGATCAGTGA ACTCCTGCGG
CATATCGGCC TCCACCTGAA GACCGGGATC CTCGCTGAGG CAGCCAGGGC CGGCATTCCG
GTCTACTGCC CGGCCCTGCA GGACTCGATG CTCGGGCTGC AGTACTGGCT CTTCTCTCAG
ACGCACAAGG TCACCATCGA CGCCTTTAAG GACATGCCGG CCCTGCTCGA CCGCTGTTTT
GCGACCGAAA AAGCCGGCGC CTTTCTGATC GGCGGCGGGG TGCCGAAGAA CTTCATCCTC
CAGTCGATGC TAATGACCCC GAATGGCTTC TCGTACGCGG TCCAGCTGAC CGGCGATCGA
CCCGACCTCG GCGGTCTCTC CGGGGCGACC CTCGACGAGG CCAGGTCCTG GGGTAAGATC
ACCGAGGAGG GGCAGGCCGT CACCGTCTAT GCCGACGCGA CGATCACCTT CCCGTTGATC
GTGGCCGCAA CCCTCGAGGA GATGCTCCAT GGCTGA
 
Protein sequence
MKGCNEPVKQ AHLTAGMSVG ALVAALRGAG AYNGGSLAEA VTIYRRMLED TETTKFFGLA 
GAMVPAGMGG IVSDLIRDGH IDLLVSTGAN LTHDVIEAIG CHHYHGTADC SDVELLHEEI
NRIYDVFLPN EAFIHFEEFM QEVYGDLEEG SVISISELLR HIGLHLKTGI LAEAARAGIP
VYCPALQDSM LGLQYWLFSQ THKVTIDAFK DMPALLDRCF ATEKAGAFLI GGGVPKNFIL
QSMLMTPNGF SYAVQLTGDR PDLGGLSGAT LDEARSWGKI TEEGQAVTVY ADATITFPLI
VAATLEEMLH G