Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0026 |
Symbol | |
ID | 7270138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 25052 |
End bp | 25909 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643568685 |
Product | cysteine-rich small domain protein |
Protein accession | YP_002465145 |
Protein GI | 219850713 |
COG category | [R] General function prediction only |
COG ID | [COG2158] Uncharacterized protein containing a Zn-finger-like domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.325796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATATT ATCTCGACGA TACCACCCTT TTTCTCCGCG GTCATTTCAC GGTTGCAGTC CAGCATGATC CAGCCCTGCT GATGACCGTC CCCCTGGTGA TGATCAGGGT CACATCCGTA GAAGAGAAGG ACCAGAGCCG GGTTGAAGAA CTGACTGCAG CCAGAGCCGG GATGGTTGGA CCAGTGTACA CCCTCTTCTC GGCAGGGATG ATCAACACCG CCGCGGTCGC ACGCTGTGAT CAGGTGACCG CCTTCGCCCA TGCTGGGCCG TCATCGGTGA GTGTGGTGAT CGTCTCAAAT CGGGCCGGAC CGGGTCTGCT GGCCGGGATC CTGGAGACTG CCGTAGCCGC AGTCGACAGG GTGCTCGAAG AGGCTGGAAC GCCAGGGTAC CGGGTGGAGG TGGTGGCGGC CACCGAGGAA GAAACAGAAT CTCCGGCCAG GACCGGCCAG GACGCGCAGG TGACGGCTGC GGTCATCGAA GCGACAGGGA CAGCGCTTCT TCGGCGCTCG CTCTCCCTAC CGAAGGACCA GACCGCCCTG AGCCGGCCGG CCTTCTCGAT CTACAGCCGG TTTGGTGGGA ACCACTGGGT GACCTGGCAG CCTGAAGGTT GTCCGTACTA CCCGTGTCAT ATGAAGGGGC AGTCCTGCAG GTACTGTTAC TGCCCGTTCT ACCCCTGTAA TGACGATGAA CTCGGCCAGC AGGTGATCGC TTCAAGTGGG AAGACGGTCT GGAACTGCAG TGAGTGCACC CTGGTGCACG AGCCGGTGGT CGCCGATTAC CTGCAGAGGA ATCCGATGGC CTCGCTCAAC GAACTCAAAC AGGTGCACCG ACACCTGATC GGACAATCCA AAACCTGA
|
Protein sequence | MRYYLDDTTL FLRGHFTVAV QHDPALLMTV PLVMIRVTSV EEKDQSRVEE LTAARAGMVG PVYTLFSAGM INTAAVARCD QVTAFAHAGP SSVSVVIVSN RAGPGLLAGI LETAVAAVDR VLEEAGTPGY RVEVVAATEE ETESPARTGQ DAQVTAAVIE ATGTALLRRS LSLPKDQTAL SRPAFSIYSR FGGNHWVTWQ PEGCPYYPCH MKGQSCRYCY CPFYPCNDDE LGQQVIASSG KTVWNCSECT LVHEPVVADY LQRNPMASLN ELKQVHRHLI GQSKT
|
| |