Gene Moth_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_1744 
Symbol 
ID3832889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp1796213 
End bp1796944 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content50% 
IMG OID637829668 
Productribosomal small subunit pseudouridine synthase A 
Protein accessionYP_430588 
Protein GI83590579 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00693564 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.573112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAA AGGAGCGGCA GCGCCTGGAT AGAGTGCTGG CCCACATGGG GTTTGGTACG 
CGTAAAATGA TTAAGAAGCT GATAAAAGAG AAAAGAGTGC AGGTCAACGG CAGGCCGGCT
GAGGACCCAG GGTTACATGT TATCCCAGGC CGGGATTACA TTGAGGTGAA CGGCGAACCC
CTGGTGTATG AAGAGTACAT CTATTTAATG TTAAATAAGC CGCAGGGTGT CCTCTCCGCT
ACAGAGGATA GATATGCCAA AGTAGTAGTC GACCTGCTTC CTCCCCGGTA TCGTGCCTTT
CATCCCTTCC CGGTAGGGAG ACTGGACAAA GATGCCGAGG GGCTGCTTTT GCTCACCAAT
GACGGCGAAC TGGCCCACCG GCTTCTATCG CCCAAAAAAC ATGTGTCCAA AATGTATTAC
GCTGTGGTAG ACGGTATAGT TACGGAAACA GACGTAGAAG CGTTCCGCCA GGGGATAATC
TTGAATGACG GCTATCGAAC CATGCCTGGC GAGTTAACGA TCCTCCGCTC CGGAACGGAA
TCGGAGGTTG AGCTCACCAT TTATGAAGGA AAATATCATC AGGTCAAACG CATGTTTGAG
GCTGTAAGTA AAAGAGTGCT ATATCTTAAA CGAATCGCTA TGGGACCCTT AAGGCTGGAC
GAACTTTTAA GGCCCGGCGA GTACCGGGAA TTGACGGAAG AAGAAATCAT CAAGCTGCGG
GAATTACTTT AA
 
Protein sequence
MAAKERQRLD RVLAHMGFGT RKMIKKLIKE KRVQVNGRPA EDPGLHVIPG RDYIEVNGEP 
LVYEEYIYLM LNKPQGVLSA TEDRYAKVVV DLLPPRYRAF HPFPVGRLDK DAEGLLLLTN
DGELAHRLLS PKKHVSKMYY AVVDGIVTET DVEAFRQGII LNDGYRTMPG ELTILRSGTE
SEVELTIYEG KYHQVKRMFE AVSKRVLYLK RIAMGPLRLD ELLRPGEYRE LTEEEIIKLR
ELL