Gene Moth_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_1727 
Symbol 
ID3833027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp1776043 
End bp1777008 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content46% 
IMG OID637829651 
ProductCRISPR-associated Cas1 family protein 
Protein accessionYP_430571 
Protein GI83590562 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.914147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGACCT ACTATATTTT TTCTTCCGGA CGCCTCCGGC GAATGGATAA TACCCTGGCT 
TTGGAGCTAG AAACAGAACG ACGCGTGGTC CCGGTGGAAG ATATTGATCA TATTTACTGT
TTTTCTGAGT TGGATTTGAA CACTAGGCTT TTAGACTTCC TGGCACAAAA ACAGATTTGC
CTCCATTTTT TCAACTACTA CGGGCACTAT TCCGGCAGTT TTATTCCCCG GGAATCCCAG
CTCTCCGGTT TTCTATTGGT AAGGCAGGTG GAGCATTACC TGGACCAGGC TAAGAGACTG
GAACTGGCCC GGACCTTTGT CGAGGGAGCA CTGCACAACA TCCGCCGCAA CCTGGAAAAA
AGGGAGTATG ATGATATTTG CAGCAAACTG GATGAGATCA GGGAGGGGAT AGGTAAGACT
GCTTCCATTG AAGAACTCAT GAGCCTGGAG GCCCATGCTC GTAAAGCCTA CTATGACACC
TGGGAAGAAA TCACGGGCTG GGAGTTTGGC AGCCGTAGCA AACGACCTCC TGCTAATGCT
TTAAATGCCC TGATTTCCTT TGGCAACGCG ATGATGTATA CGGTAGTTTT AAAGGAGATC
TACCGCACCG CCTTAAATCC GACCATTAGC TACCTGCATG AGCCATCAGA GCGAAGGTAT
TCCCTGGCCC TTGATGTTGC GGAGATATTT AAGCCGGTTT TTGTCGACAG ACTAATATTC
CGTTTGATAA ACCTCAACAT GCTAAAGGAA ACCCACTTCG ACACCAATGT CAATTTCGTC
TACCTTACCG AAGGGGGAAG GAAGGTATTT GTTAAAGAAT TTGAAGAAAC TCTGGAAAAG
ACGATTTTGC ACCGCAAGCT AAAAAGGAAT ATTCGCTATA AAAGTCTTGT CCGGTTAGAC
TTATATAAGC TTATAAAGCA CCTCCTTGGT GAAGAAAAAT ATTCCCCCAT GAAGGTGTGG
TGGTAA
 
Protein sequence
MRTYYIFSSG RLRRMDNTLA LELETERRVV PVEDIDHIYC FSELDLNTRL LDFLAQKQIC 
LHFFNYYGHY SGSFIPRESQ LSGFLLVRQV EHYLDQAKRL ELARTFVEGA LHNIRRNLEK
REYDDICSKL DEIREGIGKT ASIEELMSLE AHARKAYYDT WEEITGWEFG SRSKRPPANA
LNALISFGNA MMYTVVLKEI YRTALNPTIS YLHEPSERRY SLALDVAEIF KPVFVDRLIF
RLINLNMLKE THFDTNVNFV YLTEGGRKVF VKEFEETLEK TILHRKLKRN IRYKSLVRLD
LYKLIKHLLG EEKYSPMKVW W