Gene Moth_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_0493 
Symbol 
ID3832816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp508068 
End bp509099 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content52% 
IMG OID637828427 
ProductCRISPR-associated Cas1 family protein 
Protein accessionYP_429366 
Protein GI83589357 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03640] CRISPR-associated endonuclease Cas1, DVULG subtype 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATCC TGTTAAACAC CCTGTACCTT ATGACACCGC GCACCCTGGT GCGCTTAGAT 
CACGAGACGG TAAAAATCGA GGTGGAAGGG GAATTAAAAA TGCAGATTCC CCTGCACCAC
CTGGGCAGCA TCGTCTGTTT TGGTGATGTT ACACTTACCA CGCCCTTAAT AATGCGCTGT
GCCGAGGACA AACGCTTGAT TGTCTTTCAC GACCAGCATG GCCGTTTTAA AGCCCGCGTG
GAAGGCCCGG TATCAGGAAA CGTTTTTCTT CGCCACGCCC AGCATGAAGC CCTATCTGAT
AGTAAAAAAA CAACCGCTAT CGCCAGAAAT ATAGTCGCCG GAAAAATCCG CAATACCCGG
CAAGTTGTGC TACGCGGTGC CCGGGAAGCC GATAACGAAG ACGATAGGAA AGCCCTCCAG
GAAACAGCCA GGGAACTGGC TCACGGACTG GATGCCCTGT CACGTTCCCC CGATCTAGAG
CAAATTCGTG GTATCGAAGG TAACGCCGCC CGGCATTACT TCGCAACTCT TGATCGCATG
GTCAGAGTTA ACCGAGAAGC CTTTAAAATC ACCCACCGAA ACCGGCGGCC GCCCCTGGAC
AGGATGAACG CTTTATTATC CTATATATAT GCTCTCTTGC TGAACGATTG TCTTAGCGCT
GCCGAAGGTG TAGGGCTTGA TCCCCAGATT GGATATCTCC ACGTCCTCCG TTCGGGGCGA
CCAGCTCTGG CTTTAGATTT GATGGAGGAG TTTCGTGCAA TCCTGGCTGA CCGTTTGGCC
CTGACTTTAG TAAACCGTCG TCAGATCGAT GAAAGGGATT TTGTCGAACG CCCTGGTGGC
GCCGTGCATA TTAATGACAA CGCCAGGAAA GAGATTGCCA TTGCTTACCA GAAGCGCAAG
CAGGAAGAAG TACTTCATCC CGTCCTGAAT AGAAAGGTGC CCCTAGGGCT GGTTCCCCAT
ATCCAGGCCC GTTTACTCGC CCGTGTCCTG AGGGGAGATG CTGAGGAATA TTTGCCCTTT
ATGTACCGGT AA
 
Protein sequence
MHILLNTLYL MTPRTLVRLD HETVKIEVEG ELKMQIPLHH LGSIVCFGDV TLTTPLIMRC 
AEDKRLIVFH DQHGRFKARV EGPVSGNVFL RHAQHEALSD SKKTTAIARN IVAGKIRNTR
QVVLRGAREA DNEDDRKALQ ETARELAHGL DALSRSPDLE QIRGIEGNAA RHYFATLDRM
VRVNREAFKI THRNRRPPLD RMNALLSYIY ALLLNDCLSA AEGVGLDPQI GYLHVLRSGR
PALALDLMEE FRAILADRLA LTLVNRRQID ERDFVERPGG AVHINDNARK EIAIAYQKRK
QEEVLHPVLN RKVPLGLVPH IQARLLARVL RGDAEEYLPF MYR