Gene Moth_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_0254 
Symbol 
ID3833217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp255637 
End bp259335 
Gene Length3699 bp 
Protein Length1232 aa 
Translation table11 
GC content65% 
IMG OID637828190 
ProductUvrD/REP helicase 
Protein accessionYP_429132 
Protein GI83589123 
COG category[L] Replication, recombination and repair
[S] Function unknown 
COG ID[COG0210] Superfamily I DNA and RNA helicases
[COG1379] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00375] conserved hypothetical protein TIGR00375 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.764036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAATTTA TCGCGGACCT TCACATCCAT TCCCGCTATT CCAGGGCTAC CAGCAAAGAT 
GCCACCCCGG AGAATCTTTA CCGCTGGGCC CTTTATAAAG GCGTTACCCT GGTGGGCAGC
GGCGATTTTA CCCATCCGGC CTGGCGGGAG GAACTGAAAA ATAAGCTTGA ACCGGCGGAA
GACGGCCTCT ACCGCCTCAA GGAAGAGTTC AGCAGGCCGG TAGATGAGGA GCCGGGACCG
GGTCCGGCCG GGCCCGGGAA GGGTGCGAGG TGGCCAGCGG ACATGGGAAC CTCTGCCGGT
TGGTTTTCAA GCATCCCCAG CGAGGCCTCC GGCCGTCCCG CGGTCCGCTT TATAATCTCG
GGAGAAATCA GCACCATATA CAAAAAAAAC GGGCGGGTGC GGAAAATCCA CCACCTCATC
CTCCTGCCCG ATCTTGAGGC GGCGGAAGCC CTCAGCCGCC GCCTGGAGGA GATCGGCAAC
CTCCACTCCG ACGGCCGGCC GATCCTGGGA CTGGACAGCC GCCAGCTCCT GGAGATGACC
CTGGAGGCCT GCCCGGAAGC CGTCTTCATC CCGGCCCATA TCTGGACCCC CCATTTCTCC
CTCTTCGGCG CCAAGTCGGG TTTTGACAGC CTGGAAGAGT GCTTCGGGGA CCTGGCCGGG
TATATCTACG CCGTGGAAAC GGGGCTCTCC TCCGACCCGC CCATGAACTG GCGCCTGGCC
GCCCTGGACC GGTTGACCCT GGTTTCCAAC TCCGACGCCC ATTCACCCCG TAATCTCGCC
CGGGAGGCCA ACCTTTTCAA TACCGAGCTT TCCTACCCGT CCATCCGCCG GGCCCTCAGG
GACCGGGACG GAAAGGAATT CCTGGGGACC CTGGAGTTTT TCCCCGAAGA GGGCAAGTAT
CATTATGACG GTCACCGGAA CTGCCGGGTT CGCTGGCGGC CGGCTCAGAC CCGGGAGGCC
GGCGGCGTTT GCCCCGTCTG CGGTAAAAGG GTTACCGTCG GCGTCCTGCA CCGGGTGGAG
GAACTGGCCG ACCGTGGCGA GGGTTTCCGG CCCGCCACCG CCCGCCCCTT TGAAAGCCTG
GTCCCCCTGC CGGAGGTGAT CGCCGCCGCC CTGGGCTCGG GGGTGGCTAC CAAAAGGGTC
ACCCGGCTTT ATTTTGACCT GATCGGCCGC CTGGGGCCGG AGCTGGCGGT TCTACGGGAG
GCCCCCCTGG AGGCCATCGC CCGGGTGGGC GGGTCCCTGG TGGCCGAGGC CGTCCGGCGA
ATGCGGACCG GTGAGGTTGA TGTCCAGCCG GGGTTTGACG GCGAGTACGG CAAGATTTTA
TTACTCCGGC CGGAGGAGCG GCAGCTCTTC TCCGGGGAGC CCAGCCTGTT TGCCGGGGAA
GCCGTAACCG GCCCGGTGGC GGCAATTGAG GAGAAACACC CGGAAATTGG CGCTACAGGC
CCGGCGGGCG CGACTCTAGA GGAGGCTGGC GCAGGCCAGG GGGGAATCTT TGCCCCGCAG
GTACCGGCGG GACGGAGGAC CCGGCACCCG GAGACTGCCG CGAGCGCTGT TATTCGCCCG
GCCCCGGTGC CTGCCGGGTC CGGGGGTCCC GGATTAACCG GCGCCCTCAA CCCGGAGCAG
CAGTCAGCCG TGACGGCGGC GACAGGTCCG GTGGTGGTCA TAGCCGGCCC GGGTACGGGC
AAAACCCGCA CCCTGGTTTA CCGGCTGGCT TACCTGATAA AGGAGCGGGG CGTCGCCCCG
GGGGAGATCG CAGCCGTCAC CTTCACCAAC AAGGCCGCGG CTGAGATTCG CCAGCGGGTG
GCGGACCTGC TGGGGGACAG GGACGGTATG GAGTCCCTGA CTGTGGGGAC CTTTCACAGC
ATCTGCCTGG ACCTCCTTCA ATCTTCCCTC ACCGGGTCAC CGGGAGCGGA TCTTCAAGGA
AAACCAGTGG GCACGACGGA TACTCCGGCT TCCCCGCGGC TGACGGTCGT TGATGAAGCC
GATGCCCGGG AGATCCTGGC CGGGGTTCTG GCCGAGAAAG GAACCGGGCG CCGGGGGTTG
CCCGGCCTAC AACGGCGCAT CTCCCTTTTG AAGAGCCGCG GCCTCCTGCC CGATTCTCCG
GAAGTGCCGG CCGACCTCCG GCCAATCTAC CGGGCTTACC AGGAGCGGCT GGCGGCCTAC
GGTGTCCTCG ACTACGACGA TATCCTCCTG AAGGCCCTGG AACTTCCGGC CTTAAGGCCG
GAAGGTGCTC CCGCATTCCA GGGGCCCGTT CCCTTCACCC ATCTCCTGGT GGACGAGTTT
CAGGATGTCA ACGCCGTCCA GTACCGGCTG GTGAAGAAAT GGACCGGGGA CGGGAAGAAC
CTTTTCGTTA TCGGTGATCC CGATCAGGCC ATCTACGGCT TTCGCGGGGC CGATTATCGC
TTTTTCGGAC AACTGTTGGA GGACTTCCCC GCTGCCCGGG TCTTCCGGTT GACCAGGAAT
TATCGCTCGA CGCCGGTTAT TCTCCGGGCA GCCGCCGCCG TGGTAGCCCA TAACCCGGGC
GGCGATCTCA GGGCGGCTGC CGGGGGTGAG CTGGCAGCTA CCACCGCCAG TACCACCAGC
CCGGCAGCCG GCCCGGGTAT ATCAGGTGGG GGCGGGCTGG TGGCCACCCG CCCGGAGGGA
GGACCCATCC TCCACCTGGA AGCCCCGGGG GAAACGGCTG CGGGTATTGC CATCGTCCGG
GAGATCGGGC GCCTGGTCGG CGGAGCCACC ATGTTGCAGG CCCACGGGCA GGACGGCGGC
ACCTGGCGGG AAGGCCCGGA AACCGGAAGC GATGGGGCCT ATGGCTTCAG CGATATCGCC
GTCCTCTGTC GTACCGGGCA CCAGCTAAAG GCCCTGGAGG AATGCTTTTT AAAAGAGGGA
CTGCCCTACC GCATCGTAGG CCGGGAGAGT TTCCTGGAGG AACGCCCGGT GCGGGAGGCC
CTGGCCTTCT GCCGCTGCCT GGTGAACCCG GAGGACGATT TTCACCTCCT TAAATACCTC
GGTTCCGGAT CTGCCGGAGT CGGCGAGGAG GTTGCTATAC AGGTCAGGGA AACGGCCCTT
AAGAGGGGAG TCCCGGCCTG GCTGGTTATC AGGGAACTGG CGGGCGAACT GCAAAACTTT
ATAAACTCCC TGGAGGCTTA CCGCGCTGCC CTGGACAAGC AATCCCCGGC GGAACTCCTG
GCCCGCTGGG CCGGGGAACA TGGCCTGCTG GATGAGCCCT CTATCAGCCG GTTGTTGCGG
GTGGCGGAGC GTTTCCCGGA TTTATCTGCT TTCCTGCGCG GGGTAGTTCT GGCCGGGGAG
GCCGACCACG AACGGCCGGG GAACAATGGC GCTTCTCCGG AAGTGGTAAC CCTTATGACC
CTTCACGCCG CCAAGGGGCT GGAGTTCCCG GCGGTCTTTA TCGCCGGGGT AGAAGACGGG
CTGCTGCCCC TGAAAGAGGG GCCGGGGGTA ACCTTAAGCC CTGAGGAAAT GGCTGAGGAA
CGACGCCTCT TCTATGTGGG CATGACCCGG GCGCGGGAGC TGCTGGTCCT GGTTTCGTCC
CGTAGGAGGG AGCTAAGGGG CACGGTGGTA CCGGCGGAGC CTTCTCCCTT CCTGGGGGAG
ATACCTGCAG ACTGCCTGGT AAGGGAGACG TGGGATGCCA GGGGTAAGAA GAAAAACGGG
AAAGATGAGG AGAAGTATCA GCAACTGAGC CTGTTTTAA
 
Protein sequence
MQFIADLHIH SRYSRATSKD ATPENLYRWA LYKGVTLVGS GDFTHPAWRE ELKNKLEPAE 
DGLYRLKEEF SRPVDEEPGP GPAGPGKGAR WPADMGTSAG WFSSIPSEAS GRPAVRFIIS
GEISTIYKKN GRVRKIHHLI LLPDLEAAEA LSRRLEEIGN LHSDGRPILG LDSRQLLEMT
LEACPEAVFI PAHIWTPHFS LFGAKSGFDS LEECFGDLAG YIYAVETGLS SDPPMNWRLA
ALDRLTLVSN SDAHSPRNLA REANLFNTEL SYPSIRRALR DRDGKEFLGT LEFFPEEGKY
HYDGHRNCRV RWRPAQTREA GGVCPVCGKR VTVGVLHRVE ELADRGEGFR PATARPFESL
VPLPEVIAAA LGSGVATKRV TRLYFDLIGR LGPELAVLRE APLEAIARVG GSLVAEAVRR
MRTGEVDVQP GFDGEYGKIL LLRPEERQLF SGEPSLFAGE AVTGPVAAIE EKHPEIGATG
PAGATLEEAG AGQGGIFAPQ VPAGRRTRHP ETAASAVIRP APVPAGSGGP GLTGALNPEQ
QSAVTAATGP VVVIAGPGTG KTRTLVYRLA YLIKERGVAP GEIAAVTFTN KAAAEIRQRV
ADLLGDRDGM ESLTVGTFHS ICLDLLQSSL TGSPGADLQG KPVGTTDTPA SPRLTVVDEA
DAREILAGVL AEKGTGRRGL PGLQRRISLL KSRGLLPDSP EVPADLRPIY RAYQERLAAY
GVLDYDDILL KALELPALRP EGAPAFQGPV PFTHLLVDEF QDVNAVQYRL VKKWTGDGKN
LFVIGDPDQA IYGFRGADYR FFGQLLEDFP AARVFRLTRN YRSTPVILRA AAAVVAHNPG
GDLRAAAGGE LAATTASTTS PAAGPGISGG GGLVATRPEG GPILHLEAPG ETAAGIAIVR
EIGRLVGGAT MLQAHGQDGG TWREGPETGS DGAYGFSDIA VLCRTGHQLK ALEECFLKEG
LPYRIVGRES FLEERPVREA LAFCRCLVNP EDDFHLLKYL GSGSAGVGEE VAIQVRETAL
KRGVPAWLVI RELAGELQNF INSLEAYRAA LDKQSPAELL ARWAGEHGLL DEPSISRLLR
VAERFPDLSA FLRGVVLAGE ADHERPGNNG ASPEVVTLMT LHAAKGLEFP AVFIAGVEDG
LLPLKEGPGV TLSPEEMAEE RRLFYVGMTR ARELLVLVSS RRRELRGTVV PAEPSPFLGE
IPADCLVRET WDARGKKKNG KDEEKYQQLS LF