Gene Moth_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_0040 
Symbol 
ID3830906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp40737 
End bp41513 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content58% 
IMG OID637827972 
Productpolysaccharide deacetylase 
Protein accessionYP_428922 
Protein GI83588913 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID[TIGR02764] polysaccharide deacetylase family sporulation protein PdaB 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000142029 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCCTGC TCTGGCACCG GCGCCGGATA AGCAATTTCC TGATCCCGGT GCTTTTGTTT 
TTCCTGGGGC TTATGCTGGG GGCCTGGCTG GCCGATTGCC AGCCCCTGGC GGCCCTGGTT
GGGCGTACCA ACAGGCTTTT ACCCATTTAT AGCGTGGGCA CCACGGAAAA AAAGGTGGCC
CTCTCCTTTG ACGCCACCTG GGGGGCGGAG TATACCCCCA AGTTGCTGGC TACCCTTAAA
CAGCACGGTG TCAAGACGAC CTTTTTCCTG ACCAACATCT GGCTCAAAAA GTATCCTGAT
GTGGCCAGAC AGATAGCCGC CGACGGCCAT GAAATCGGCC TCCACTCGGC CTCCCATCCC
CATTTTACCG CCCTGAGCCC GGCGGAAATG GAAAAGGAAC TGCAGGAGAA CAGCCGTATG
GTTACGGAGG TGACGGGTTA TAAGGCTGAG CTCTTCCGGC CGCCCTTTGG TGACTACAAC
GACACGGTCA TCAGGACGGT GGAGAGGCTG GGTTACCGGG CCATCCAGTG GGATGTCGAT
TCCCTGGACT GGCAGGAGCA AATGACGGCT ACGGATATCT ATAACCGGGT AGTCAAGGGC
ATCAAACCGG GTTCCATTGT CCTGTTCCAT AATAATGGCC GTTATACGGC CGATGTCCTG
GGCCCCCTCC TGGATAAGCT GAAGGCCGAC GGCTACCAGG TGGTGCCGGT GGGGCAACTG
ATTCTCAAGG GTGATTACTA CGTGGATCAC GCCGGGGTCC AGCGCGCCGG GCGCTGA
 
Protein sequence
MILLWHRRRI SNFLIPVLLF FLGLMLGAWL ADCQPLAALV GRTNRLLPIY SVGTTEKKVA 
LSFDATWGAE YTPKLLATLK QHGVKTTFFL TNIWLKKYPD VARQIAADGH EIGLHSASHP
HFTALSPAEM EKELQENSRM VTEVTGYKAE LFRPPFGDYN DTVIRTVERL GYRAIQWDVD
SLDWQEQMTA TDIYNRVVKG IKPGSIVLFH NNGRYTADVL GPLLDKLKAD GYQVVPVGQL
ILKGDYYVDH AGVQRAGR