| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_8628 |
|---|
| Symbol | |
|---|
| ID | 7300844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011892 |
|---|
| Strand | - |
|---|
| Start bp | 365576 |
|---|
| End bp | 366562 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643597619 |
|---|
| Product | TRAP dicarboxylate transporter, DctP subunit |
|---|
| Protein accession | YP_002495195 |
|---|
| Protein GI | 220919892 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTACTGT CTCGTCGTGG CTTGATCGCC GCTGGCCTGT CTGCGCCTTT CATTGCTCAG
TCAAATTTCG CCCAAGCGGC GCAGCACACA CTGAAATTCG TCTACCCAGA TACACCCTCG
CACCCGTTCA TGCAGGTCGC CCGACGCTTC GCCGACAGCG TCAAATCAAG GACTGAGGGC
GCAGTTGAGG TGCAGGTCTT CACGACAGGG CAGCTCGGTT CCCAAGGTAA CATGCTCACC
GGCATGCAGA CCGGCATCAT TGACCTCTGC TGTCATACGT CGGGCTTCGT CCAAACGCTC
TACCCGAAAT TCATGGTCGT CGACCTGCCC TTCCTCTTCA AGGACGCGGA GACTGCCGAA
CGCATGCTGG ATGGCCCCAT CGGGCCGAAA CTGCTGCAAG ATCTGCCGAG CAAGGGTATC
TATGGTTTAT CCTATGGCCA TTTCGGCTGG CGGGTGGTCT CAACGATAGG CCGCTCGGTC
AAGGTGCCAA GCGAAGCCAA GGGGATGAAA ATCCGTGTTC AACCCGGCGC AATTTACGCC
GCGATGTTCA ACACGCTCGG CGCCAACCCT ATCCAAATTG ACCTGTCTGA GATTTATCTC
GCCTTGTCTC AGAGCGCGAT CGAAGCCATC GAGACCCCGA TGATTTCGAT GGCAGCGTCG
AAACACGACG AGGTGATCAA GGTTATTACA AAGACTAATC ACGTCTACAA TCCAGGAATT
ATGATGGCAA GCAAGCGCAA GCTTGATAGC CTTGCATCCA AATACCAGCA AGTAATTCGA
GAAGCGTCGT TCGAGATGAC TAAGGACGCG CGCTCCACAA TTTCCAAGGC AAGCCAAGAG
GTCGAAGGCC GTTTTGCGTC GCAAGGAATC ACGATCCAGC CTGCTGATCG TGCCGCCTAC
AGGACCGCAA TGCAGCCCGT CTACGATCAG TTCCGGCCCA TCATCGGTGC CGATCTGATG
GACGAAGTCC TGAGCCAAGT GGCCTGA
|
|---|
| Protein sequence | MVLSRRGLIA AGLSAPFIAQ SNFAQAAQHT LKFVYPDTPS HPFMQVARRF ADSVKSRTEG
AVEVQVFTTG QLGSQGNMLT GMQTGIIDLC CHTSGFVQTL YPKFMVVDLP FLFKDAETAE
RMLDGPIGPK LLQDLPSKGI YGLSYGHFGW RVVSTIGRSV KVPSEAKGMK IRVQPGAIYA
AMFNTLGANP IQIDLSEIYL ALSQSAIEAI ETPMISMAAS KHDEVIKVIT KTNHVYNPGI
MMASKRKLDS LASKYQQVIR EASFEMTKDA RSTISKASQE VEGRFASQGI TIQPADRAAY
RTAMQPVYDQ FRPIIGADLM DEVLSQVA
|
|---|
| |