Gene Mnod_8627 details

Gene Information

• Locus tag: Mnod_8627
• ID: 7300843
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium nodulans ORS 2060
• Kingdom: Bacteria
• Replicon accession: NC_011892
• Strand: -
• Start bp: 363627
• End bp: 365558
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643597618
• Product: TRAP dicarboxylate transporter, DctM subunit
• Protein accession: YP_002495194
• Protein GI: 220919891
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component; [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component
• TIGRFAM ID: [TIGR00786] TRAP transporter, DctM subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTGAACA TTCTGGCCAA CGGTGCGCCG GAGGCAGTCC ATCTCGGATC GGCTCCGGCC 
CCAGAAGCTC TGCCCGAGCG CGGAGCCCTC GCACGCGCCT ACCAGCGTGT CATGGAGATG 
ATCGGCTGGC TTGCCCGGGC TGTCTTGTTC GTCGTGCTCG TCGGAGAGCT TTGCCTTATC 
CTTGTCGAGG TTAGCCAGCG CATTTTCTTC GGCCACTCCT TCCTCTGGGC CGAGGAGATC 
TCGCGCCTGG CGCTTCTCAC GATCGCCTTC ATCGGCGGGG CGCTCGCCTA TAGGAGTCAC 
CAGCACACCA CGGTCGCGCT CGTCACCGAC GCACTCTCCG CGCCACTCCG CCGGATGGTG 
ATGGCGATGA TAGACGTCAC CATCCTCATG ATTGCCGCCG TGGCATTCCT GGCTGCGACC 
GATCTGCTTC AGATCAACGC TCAGTCGATC ATGCCGATGC TGCAATGGAA TCTCGGCCTC 
ACGGTTGTGC CATTCATTGC CGGCATGCTG CTAATTGGGC TCTTTGCAAT TGAGCGTCTG 
CTCATCGTGC ATCGGTTGGT TCCGGTTGTG CAAGCCGCGA TTGCCGCCGG GATCATCGGT 
GGAATCGTTT ACACGATGAG CCTTATTCCC GAGATCCGCC TGGAAACGGG TTCGGCACTC 
GTCGCGATGT TGGTCGTATT TTTCGCCATC ATCTTGCTTG GTCTGCCGGT TGCATTCGCG 
ATGCTGCTCG GGTCAATCCT CTTTTTGCTG GCGACTGACC TCGCACCGAC TGTCGCGGTC 
GCTCAGAATA CAATCGACGG CTCAGGGCAT TTTATTCTCC TCACACTGCC GTTCTTCATC 
TGGGCCGGCA TGATCATGGA AAAGGGCGGC ATCAGTCGCC GGCTGGTCGG ATTGGCAATG 
GCGCTGGTCG GCCATTTCCG TGGCGGCTTG CTGCAAGTTG TCATCATGAC AACGTACTTG 
GTTTCAGGGG TCTCGGGATC AAAAATCGCC GATGTCGTCG CAGTCGGCTC AGTCATGCGC 
GACGAGCTGG AGCGCAAGGG ATACCACCCG AAGGATGGTG CCGCCGTCCT GTCGGCCTCT 
GCAGCCATGT CGGAGACGAT CCCGCCCAGT ATCGCCATGC TGGTCTTGGG CTCGGTTGTT 
CCGGTCTCGA TCGGGGCCAT GTTCATCGCG GGCCTGTTAC CGGCCGCAGT GCTGGCTCTG 
ATCCTCATGG CGTTGGTGTA CGTCATGGCG GTCCGCAACC CGACCATCCA TGTCGAGAAG 
GCGAGCAGGG CCGTCGTTGT CGAGGCCACT CTCGGTGCGA TCCTCCCGTT GCTGATGCCA 
GCGATCCTTG TCGTGGGGAT CAAATTTGGC CTTGCGACGC CGACCGAGGT GTCCTCCGTT 
GCCGTTCTCT ACGGTATTTT GCTGTGCGCC CTCGTCTACC GATCGATCGG GTGGGGTAGT 
TTCATCAAGA TCGCTGTCGA GTGCGCGATA ACCTCGGGCA TGGTGCTGTT CATCATCGCT 
GCCGCGGGCT CCTTCGCCTG GATCATGGCG GCCGGCAACC TTCCTCAGCA CCTCGTGACG 
CTCCTCCACG CCGCCGGCGA CAACCGCTAT CTGTTCCTGG CCGGCTCGAT CCTGATCCTC 
ATCGTAGTCG GCTCGCTTCT TGAGGGGCTG CCGGCCCTGA TCATTCTCGG GCCCATCCTC 
TATCCGATGG CGACGCAACT CGGCATCGAT GGTGTGCACT ACGCCATGGT GCTGCTGCTC 
TCGATGGGTG TTGGCATCTT CATGCCACCC TTGGGCATCG GCTTCTACGT GGCCTGCTCA 
GTCATGGGTA CGAGCGTCGA ACAGACGTCG AAGGCGATCC TTCCATATCT GCTCGCGCTT 
CTGTTTGGTA TTCTCGCAGT ATCGGCGGTT CCATTCTTCT CATTGGCACT GTTGCATGTA 
TTTGGACGCT GA 

 

Protein sequence

MVNILANGAP EAVHLGSAPA PEALPERGAL ARAYQRVMEM IGWLARAVLF VVLVGELCLI 
LVEVSQRIFF GHSFLWAEEI SRLALLTIAF IGGALAYRSH QHTTVALVTD ALSAPLRRMV 
MAMIDVTILM IAAVAFLAAT DLLQINAQSI MPMLQWNLGL TVVPFIAGML LIGLFAIERL 
LIVHRLVPVV QAAIAAGIIG GIVYTMSLIP EIRLETGSAL VAMLVVFFAI ILLGLPVAFA 
MLLGSILFLL ATDLAPTVAV AQNTIDGSGH FILLTLPFFI WAGMIMEKGG ISRRLVGLAM 
ALVGHFRGGL LQVVIMTTYL VSGVSGSKIA DVVAVGSVMR DELERKGYHP KDGAAVLSAS 
AAMSETIPPS IAMLVLGSVV PVSIGAMFIA GLLPAAVLAL ILMALVYVMA VRNPTIHVEK 
ASRAVVVEAT LGAILPLLMP AILVVGIKFG LATPTEVSSV AVLYGILLCA LVYRSIGWGS 
FIKIAVECAI TSGMVLFIIA AAGSFAWIMA AGNLPQHLVT LLHAAGDNRY LFLAGSILIL 
IVVGSLLEGL PALIILGPIL YPMATQLGID GVHYAMVLLL SMGVGIFMPP LGIGFYVACS 
VMGTSVEQTS KAILPYLLAL LFGILAVSAV PFFSLALLHV FGR