| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_8333 |
|---|
| Symbol | |
|---|
| ID | 7300950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011892 |
|---|
| Strand | + |
|---|
| Start bp | 74542 |
|---|
| End bp | 75315 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643597386 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002494963 |
|---|
| Protein GI | 220919660 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.319832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAA TCCAGAACGA CGGCTTTGCC GGCAAGGTCG CCTTCGTGAC CGGCGCGACG
AGCGGCATCG GGCGCGCCAC GGCCCTGGCC TTCGCCCGGG CGGGTGCGAG CGTGGCGCTC
GCGGACGTGT CGCAGGAGGG CAGCCGCGAA GCGGCCCGCA TCATCGAGGA GGCGGGCGGG
CGCGTCCTCG CCGTCCGGTG CGACGTGAGC AAGGCCGAGG ACGTGAAGGC GGCGCTCGAC
AGGACGGTCG AGACGTTCGG GGGGCTCGAC TTCGCCTTCA ACAACGCCGG GGTCGAGCAG
CCGGTCATGG CGGCCGCCGA CATCGCGGAC GAGGATTTCG ACCGCATCGT CGCGGTCAAC
CTGCGCGGCG TGTTCCTGTG CATGAAGCAC CAGATCCCCC TGATGCTGCG CGGCGGGGGT
GGCGCCATCG TGAACACCTC CTCGGGCGCC GGGGTGAAGG GCTTCGCCGG CCAGGCCGCG
TACACCGCGA CCAAGCATGG GGTGATCGGG ATGACCAAGT GCGCGGCCCT CGACTACGCG
AAGGAGAACA TCCGGGTGAA CGCCATCTGC CCCGGCATCA TCGACACCCC GATGATGCAG
CGTTTCACGG GTGGGACCCC CGAGGGCGTG GCGCGGGTGG TCGCGCAGGA GCCGGTCGGC
CGCATGGGCA AGCCCGAGGA GATCGCCGCC GCGGTCCTCT ACCTGTGCTC GGCCCCGGCC
GCCTTCGTGA CCGGACACGC CATGGTGGTC GACGGCGGCC AGACGGTGGG CTGA
|
|---|
| Protein sequence | MTTIQNDGFA GKVAFVTGAT SGIGRATALA FARAGASVAL ADVSQEGSRE AARIIEEAGG
RVLAVRCDVS KAEDVKAALD RTVETFGGLD FAFNNAGVEQ PVMAAADIAD EDFDRIVAVN
LRGVFLCMKH QIPLMLRGGG GAIVNTSSGA GVKGFAGQAA YTATKHGVIG MTKCAALDYA
KENIRVNAIC PGIIDTPMMQ RFTGGTPEGV ARVVAQEPVG RMGKPEEIAA AVLYLCSAPA
AFVTGHAMVV DGGQTVG
|
|---|
| |