| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7800 |
|---|
| Symbol | |
|---|
| ID | 7295750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011887 |
|---|
| Strand | - |
|---|
| Start bp | 28902 |
|---|
| End bp | 29807 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643592368 |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_002490000 |
|---|
| Protein GI | 220914692 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTCT ACGGTACCAA CCCCATCGCC TGGTCGAATG ACGACGACCA GAGCATCGGC
GCACATCTGA CGCTGGACGA TTGTCTCTCG GACTGCCGAA AAATCGGCTT CGACGGAATC
GAGAAGGGTC ACAAGATGCC CGACGACGGC ATGGCGCTGA AGGCGCGGCT GGCCGAATAC
GGGCTGCGTT ATGCCGCCGG CTGGCATTCG ACCAATCTTC TGGTCAACGA CATTGACACG
GAGAAGACCG CGCTGGCGCG GTTCATTGAG ATGACGAAGG CGGCGGGTGG CGACCACATC
AATGCCTGCG AATGCTCCAA CACAGTCCAC GGCAATGCCG CGGTGCCGGT CAACGACCGC
CCGATCATGA CCGACCCCCA ATGGGAGCGC TTCTCCGCCG GATACGAGGA ATTGTCGCGC
TTCGCGGCCG ATCGGGGCGT GAAGATGGGC TACCATCACC ACATGGGAAC GATCATCGAA
AGCGGCGCGG ATATCGATCG CTTCATGGCC ATGGCCGGGC CGCACACGCA TCTGTTGCTC
GACACCGGCC ACTGTACTTT TGGTGGCGCG GATCCGGCGG CGGTCGCAGA GAAATACATG
AATCGCGTCA CCCACATCCA TTGCAAGAAC ATCCGGCCTG AGATCATGCG GCAGGTGCGC
GAGGAAAATC TCTCCTTCCT GGAAGGGGTA CGTCGCGGCG TCTTCACCGT GCCTGGGGAT
CCAGAGGGCT GCGTCGATTT CGCGCCGGTG TTGCGGATCG CCGCGGAACA GGGCTATTCG
GGCTGGCTGG TGATCGAGGC GGAGCAAGAT AGCCTCATGC GCGAGCCGTT CTTTTACCAG
AACATGGGGC TCGCGGCACT GAGGAACATG GCGGGCGCGG CCGGGCTTGA CAAGGTTGCA
GCTTGA
|
|---|
| Protein sequence | MILYGTNPIA WSNDDDQSIG AHLTLDDCLS DCRKIGFDGI EKGHKMPDDG MALKARLAEY
GLRYAAGWHS TNLLVNDIDT EKTALARFIE MTKAAGGDHI NACECSNTVH GNAAVPVNDR
PIMTDPQWER FSAGYEELSR FAADRGVKMG YHHHMGTIIE SGADIDRFMA MAGPHTHLLL
DTGHCTFGGA DPAAVAEKYM NRVTHIHCKN IRPEIMRQVR EENLSFLEGV RRGVFTVPGD
PEGCVDFAPV LRIAAEQGYS GWLVIEAEQD SLMREPFFYQ NMGLAALRNM AGAAGLDKVA
A
|
|---|
| |