Gene Mnod_7557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_7557 
Symbol 
ID7307938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp7665449 
End bp7667332 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content75% 
IMG OID643605111 
ProductGAF modulated sigma54 specific transcriptional regulator, Fis family 
Protein accessionYP_002502596 
Protein GI220927294 
COG category[K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3284] Transcriptional activator of acetoin/glycerol metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGCC GCGTGGCGAC GCCCCGCACG CTCCTGGCTG CGCGCCAGCG CGTGTTCGCG 
CAGGGCGGCG TCGACGGGGT GCCGGACCCG ATCCTGCGCT CCTGGCAGCG CTGCGCGGCG
CTGGGCCTCG ATTTCGGCGC CAGGCCTCGG GTCGAGCCGC TGACCGAGCG CGAATTGCGC
GAGGCCTGGG AGCGCAACGA CGCGCTGCGC CGCCGCTGCC GCCCGGAGAT CGAGGCGCTC
CATGCCGACG CGCAGGCGAC CGACAGCCTC GTCATCCTCA CCGATGCGAA CGGGCTCGTC
CTCGACACAA TCGGCAGCAC CGCCTTCGCG GGCCGTGCTG CCCAGGTGGC GCTTCGCCCC
GGCGTGCCCT GGAGCGAGGC CGTCACCGGC ACGAACGCCA TCGGAACGGC GCTGATCGAG
CGCCGGCCGG TCGAGGTGCA CGGGCCCGAA CATTATTTCG AGCCGCACCG CATCCTCAGC
TGCGCGGCGA TGCCGATCCT CGGCATGCGG GGCGAGACGC TGGGCGCCCT CGACCTGTCG
GGGCCGGCGG CCGTGCACCA CATGCACGCG CTCGGGCTGA TCCGGCTCGC CGTCGACGCG
ATCGAGCACC GGCAGTTCGA GGCGCCGGCC CCGGACCGCG CGACCTTGCG GCTCCACTAC
GATCCGGCGC TGCTCGGCAC GCCGCGCGAG GGCGTGCTGG TCTTCGCCGA GAACCGGCTC
GTCGGCGCCA ATCGCGCCGC CCTCGCGCTG CTCGGGCTCG ACTGGGACGC CCTCGACCGG
ACGGTTTTCG AGGCCCTGTT TCCCGACCAG CGCGCTCCGG CGCCGGGCCC CTTAAGCCTG
CGCGACGGGG CCGGCCGCGC CTTGCGCGGC CATTTCCAGG CCGAGCCGGC CCGGCCGCAG
CCGCGGCGGA AGGCCGCCCC CGCAGCCTCC GCCGAGCATC CGGTCTTCGA TCCCGGAACC
GAGCACCTGC TGGCCCGCGC GGTGCGGCTG CTTGATGCGG GCATCCCGAT CGTCGTCGAG
GGCGAGACCG GCACCGGCAA GGAGGTTTTT TCGCGATCAG TGCATGCCCG TTCGGCCCGG
GCGCAGGCCC CCTTCGTCGC GGTGAACTGC GCGGCGCTCC CCGAGAGCCT GATCGAGGCC
GAGCTGTTCG GCTACGAGCC GGGCGCCTTC ACGGGCGCGG CCAGGCACGG CGCCAAGGGC
CTGCTGCGGC AGGCCGATGG CGGCCTCCTG TTCCTCGACG AGATCGGCGA CATGCCGCTG
TCCCTGCAAT CGCGCCTGCT GCGGGTGCTA CAGGAGCGCG AGGTGCAGCC GGTCGGCGGC
GGGCGCCCCG TGCCGGTCGA TTTCACGCTG ATCTGCGCGA CGCACCGCGA CCTCGGCCAA
CTGGTGGAGG AGGGGCGCTT CCGGGCCGAT CTCTACTACC GCATCGCGCC CTACCGGGTG
GCACTGCCCC CCTTGCGCGC GCGCAGCGAC CGCCTCGCTC TCGTACGGAC GCTGTGGGAC
CGGCTCGGCG GCGGCCTGCA CCGCATCGCG CTCGCGCCCG CCTGCGCGGC GGCCCTGGCG
GAGGCCGAAT GGCCGGGCAA TTTCCGCCAG CTCGTCGGCA CGCTGCGCGC GCTCCTCGCC
CTGGCGGATC CGGGGGACGT GGTGGGGCTA GACGCCCTGC CGGAGACCCT CCGGCGGCCG
ATGCCCATCA TGGCCGCGCC GCCCGAGGCG GCTGCGCAGT CCCGCGCGAC GGTGCCGCCG
GCCGGGGACC GTCTCGACAG CATCGCCCGG GAGGCGATGC GGGCGGCCCT CGACGCGGCA
GGCGGCAATG TCTCGGAGGC CGCGCGCCGC CTCGGGATCA GCCGGAGCAC GCTCTACAGG
CGCTGCCTCT CCGAGCGCGG GTAG
 
Protein sequence
MESRVATPRT LLAARQRVFA QGGVDGVPDP ILRSWQRCAA LGLDFGARPR VEPLTERELR 
EAWERNDALR RRCRPEIEAL HADAQATDSL VILTDANGLV LDTIGSTAFA GRAAQVALRP
GVPWSEAVTG TNAIGTALIE RRPVEVHGPE HYFEPHRILS CAAMPILGMR GETLGALDLS
GPAAVHHMHA LGLIRLAVDA IEHRQFEAPA PDRATLRLHY DPALLGTPRE GVLVFAENRL
VGANRAALAL LGLDWDALDR TVFEALFPDQ RAPAPGPLSL RDGAGRALRG HFQAEPARPQ
PRRKAAPAAS AEHPVFDPGT EHLLARAVRL LDAGIPIVVE GETGTGKEVF SRSVHARSAR
AQAPFVAVNC AALPESLIEA ELFGYEPGAF TGAARHGAKG LLRQADGGLL FLDEIGDMPL
SLQSRLLRVL QEREVQPVGG GRPVPVDFTL ICATHRDLGQ LVEEGRFRAD LYYRIAPYRV
ALPPLRARSD RLALVRTLWD RLGGGLHRIA LAPACAAALA EAEWPGNFRQ LVGTLRALLA
LADPGDVVGL DALPETLRRP MPIMAAPPEA AAQSRATVPP AGDRLDSIAR EAMRAALDAA
GGNVSEAARR LGISRSTLYR RCLSERG