| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7299 |
|---|
| Symbol | |
|---|
| ID | 7306537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 7394182 |
|---|
| End bp | 7394964 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643604853 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002502341 |
|---|
| Protein GI | 220927039 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCG GCCTGACAGG CAAGCGTGCC ATCGTCCTCT CCTCCAGCCG CGGCCTCGGG
CGCGGCATCG CCGAAGGGCT CGCGGCGGAG GGCGCGAACG TGCTCCTCGC GGCGCGCAGC
GCTGAGCGCC TGAACGAGGT GGTCGCCGCC ATCAACGCGC GCGGCCAGGG CCGCGCCTTC
GCGGTCGCGG GCGACCTGCG GGAGAGCGTC GCGGCGATCC ATGCCGCCGC ACAGGAGCAT
CTTGGCGGCG TCGACATCCT GGTCGCCAAT ACGGGCGGCC CGCCGGCCGG GCAGGCGACG
AAGGTCGCCC CCGAGGCCTG GGCGCCCCAG TTCGACGCCA TGGTGGTGCC GGTGATCCGG
CTCGCCGGCC TCGTGCTGCC GGGGATGCGG CAGGCGGGCT TCGGGCGCAT CCTGATCGTG
GCGTCGAGCG GCGTCGAGCA GCCGATCCCG AACCTCGTGA TGTCGAATGC GCTGCGCGCC
TCACTCGCCG GCTGGGCGAA GACGCTGGCG AGCGAGGTGG CGGCCGAGGG CGTGACCGTC
AACATGATCC TGCCGGGCCG CATCGAAACC GACCGCACGG GCGAGCTCGA CGCCGCCAAC
GCCAAGGCGC AGGGCAAGAC CCCGGCCGAG ATCGCCGAGG CCGCCCGCGC GGCGATTCCG
GCCAGGCGCT ACGGCCGGGT GCAGGAATTC GCGGATGTCG CCTGCTTCCT CGCCTCGGAG
CGGGCCTCCT ATGTCACCGG CAGCATGATC CGGGTCGACG GCGGGGCGAT CCGCTCCGTC
TGA
|
|---|
| Protein sequence | MDLGLTGKRA IVLSSSRGLG RGIAEGLAAE GANVLLAARS AERLNEVVAA INARGQGRAF
AVAGDLRESV AAIHAAAQEH LGGVDILVAN TGGPPAGQAT KVAPEAWAPQ FDAMVVPVIR
LAGLVLPGMR QAGFGRILIV ASSGVEQPIP NLVMSNALRA SLAGWAKTLA SEVAAEGVTV
NMILPGRIET DRTGELDAAN AKAQGKTPAE IAEAARAAIP ARRYGRVQEF ADVACFLASE
RASYVTGSMI RVDGGAIRSV
|
|---|
| |