| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7244 |
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| Symbol | sdhA |
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| ID | 7302816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | - |
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| Start bp | 7338419 |
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| End bp | 7340245 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643604798 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002502286 |
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| Protein GI | 220926984 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0389176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACCA ACGGAAAAGC CGCGCCGGCC CAGACCGGCA AGGCGTACCC CATCGTCGAT
CACACCTTCG ACGTCGTCGT CGTCGGCGCG GGCGGCGCGG GCCTTCGCGC CACGGTCGGC
TGCAGCCAGG CCGGGCTTCG CACCGCCTGC ATCACCAAGG TGTTCCCGAC CCGCTCGCAC
ACCGTGGCGG CGCAGGGCGG CATCTCGGCC TCCCTCGGCA ATATGGGGCC GGACGACTGG
CGCTGGCACA TGTACGACAC CGTGAAGGGG TCGGACTGGC TCGGCGACCA GGACGCGATC
GAATACCTGG TGCGCAACGC GCCGGCCGCG GTCTACGAGC TCGAACATTG GGGCGTGCCC
TTCTCGCGCA CCGCCGAGGG CAAGATCTAC CAGCGGCCCT TCGGCGGCAT GACCACCGAA
TACGGCAAGG GCACGGCCCA GCGCACTTGC GCGGCCGCCG ACCGCACCGG CCACGCCATG
CTGCACACCC TCTACGGGCA GGCGGCCAAG AACAAGACCA ACTTCTTCAT CGAGTATTTC
GCCCTCGACC TGATCATGGA CGAGGAGGGG CGCTGCCGCG GCGTGATCGC CCTCGACCAG
TCCACGGGCG AGATCCACCG CTTCCGCGCC GCCATGACCA TCCTGGCGAC GGGCGGCTAC
GGGCGCGCCT ATTTCTCGGC GACCTCCGCC CATACCTGCA CGGGCGACGG CAACGCCATG
GTGCTGCGCG CCGGCCTTGC GCTCGAGGAC ATGGAATTCG TGCAGTTCCA CCCGACCGGC
ATCTACGGGG CGGGCTGCCT GATCACCGAG GGCGCGCGCG GCGAGGGCGG CTACCTGACC
AATTCCGAGG GCGAGCGCTT CATGGAGCGC TACGCGCCCT CGGCCAAGGA CCTCGCCTCG
CGCGACGTGG TCTCCCGCTC CATGACCATG GAGATCCGCG CCGGCCGCGG CGTCGGCAAG
AACAAGGACC ACATCTTCCT GCACCTCGAC CACCTCGACC CCAAGATCCT GCACGAGCGC
CTGCCCGGCA TCTCGGAATC CGCCAAGATC TTCGCGGGCG TCGACGTGAC CAGGGAGCCG
ATCCCGGTGC TGCCGACCGT GCATTACAAC ATGGGCGGCA TCCCGACGAA CTATCACGGC
GAGGTGCTGA CCCTGAAGGA CGGCAACCCG GATTACGTGG TGCCGGGCCT GATGGCGATC
GGCGAGGCGG CCTGCGTGTC GGTGCACGGC GCCAACCGGC TGGGCTCGAA CTCGCTCATC
GATCTCGTGG TGTTCGGCCG CGCCGCGGGC CTGCGCTGCG CCGAGGTCAT CGAGGCGAAT
GGCCGCCAGC CCGACCTGCC GCGGGATTCC GCCGACAAGG CGCTCGCCCG CCTCGACCGC
TTCCGCTACG CCAACGGCAG CAAGCCCACC GCGGAACTCC GCCTCGACAT GCAGAAGACC
ATGCAGAACA ACTGCGCGGT CTTCCGCACC GGCGAGGTGC TGGAGGAGGG CAAGCACCTC
ATCCACCAGG TCTGGTCGGG CATCGACGAC ATCCGCGTCA CCGACCGCTC GATGGTGTGG
AACACCGACC TCCTGGAGAC GCTGGAATTC GACAACCTGA TCGGCCAGGC GGTGGTGACC
ATGGAATCGG CGGTCAACCG CACGGAATCC CGCGGCGCGC ATGCCCGCGA GGACTTCCCG
GACCGCAACG ACAAGGACTG GATGAAGCAC ACGCTCGCCT GGCTCGACAG TGAGGGCCGC
AAGGTCACGA TCGATTACCG GCCGGTCCAC ACCTACACGA TGTCGAACGA CATCGCGTAT
ATCGAGCCGA AGGCGCGGGT CTACTGA
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| Protein sequence | MATNGKAAPA QTGKAYPIVD HTFDVVVVGA GGAGLRATVG CSQAGLRTAC ITKVFPTRSH
TVAAQGGISA SLGNMGPDDW RWHMYDTVKG SDWLGDQDAI EYLVRNAPAA VYELEHWGVP
FSRTAEGKIY QRPFGGMTTE YGKGTAQRTC AAADRTGHAM LHTLYGQAAK NKTNFFIEYF
ALDLIMDEEG RCRGVIALDQ STGEIHRFRA AMTILATGGY GRAYFSATSA HTCTGDGNAM
VLRAGLALED MEFVQFHPTG IYGAGCLITE GARGEGGYLT NSEGERFMER YAPSAKDLAS
RDVVSRSMTM EIRAGRGVGK NKDHIFLHLD HLDPKILHER LPGISESAKI FAGVDVTREP
IPVLPTVHYN MGGIPTNYHG EVLTLKDGNP DYVVPGLMAI GEAACVSVHG ANRLGSNSLI
DLVVFGRAAG LRCAEVIEAN GRQPDLPRDS ADKALARLDR FRYANGSKPT AELRLDMQKT
MQNNCAVFRT GEVLEEGKHL IHQVWSGIDD IRVTDRSMVW NTDLLETLEF DNLIGQAVVT
MESAVNRTES RGAHAREDFP DRNDKDWMKH TLAWLDSEGR KVTIDYRPVH TYTMSNDIAY
IEPKARVY
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