Gene Mnod_6538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6538 
Symbol 
ID7307316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6624597 
End bp6625700 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content69% 
IMG OID643604109 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_002501610 
Protein GI220926308 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAC CGACGAGCGA CGCGATCATC AACGCGCTGC CGCTTCCGGT GCTCACCATC 
GGGCCGGACG AGCGGATCCT CCAGGTCAAC ATGGCCGCGG AGCATTTCTT CGACTACTCG
CGCCGGCTGA TGCAGCGCCA GCGCCTGCGC GACATCATTC CGTTCTCCTC GCCGATCATC
GCCCTCGTGA ACGAGGTGCG GCGGCGGCGG TCGAGCGTGA GCGAGTACCG GGTGGAACTG
GGCTCGCCGC GCTTGAGCAT CGAGCGCAGC GTCGACGTGT TCGCGACCTA TCTCGACGAC
GAGATGGTGG TGCTGATGCT CCAGGAGCGC ACCATCGCGG ACAAGATGAA CCGCCAGCTC
ACCCACCGGC AGGCGGCGCG CTCGATGGTG GCGCTCGGCG CCATGCTGGC CCACGAGATC
AAGAACCCGC TCGCTGGCAT CCGGGGCGCC GCGCAGCTCC TGGAGCAGTC GGCGGCCGAG
GACGACCGGC TGCTCACCCG CCTCATCTGC GACGAGGCCG ACCGGATCGT GCGCCTCGTC
GAGCGCATGG AGCTGTTCGG AGACGAGCGC CCGGTCGAGC GCGGGCCGGT CAACGTCCAT
GGCGTGCTGG ATCAGGTGAA GCGCTCGGCC CAGTCGGGCT TCGCCCGCCA TATCCGCTTC
GTCGAGAACT ACGACCCCTC GCTGCCGCCT GTCCTCGGCA ACCGCGACCA GCTCATCCAG
GTGATCCTCA ACCTCGTGAA GAACGCCGCC GAGGCGATCG GCGCGGATGC AGTCGATGGC
GAGATCACGC TCTCGACGGC CTTCCGCACC GGCCTTCGCC TGCAGGTGCC GGGCTCGCGC
GAGCGGGTGA GCCTGCCGAT CGAGGTGGCG GTGCGCGACA ACGGCCCGGG CGTCAGCGCC
GATCTGCTGC CCGACCTGTT CGACCCCTTC GTGACCACCA AGGCGCAGGG GTCGGGCCTC
GGCCTCGCCC TCGTCGCCAA GATCGTCGGC GACCATGGCG GCATCGTCGA ATGCGATCCC
GCCCCGCGCC GCACCACCTT CCGCGTTCTC CTGCCGATGT CCCACGCCCG CGACGGGCGC
GAATCGGCCC CGGATGTCGA GTAG
 
Protein sequence
MSAPTSDAII NALPLPVLTI GPDERILQVN MAAEHFFDYS RRLMQRQRLR DIIPFSSPII 
ALVNEVRRRR SSVSEYRVEL GSPRLSIERS VDVFATYLDD EMVVLMLQER TIADKMNRQL
THRQAARSMV ALGAMLAHEI KNPLAGIRGA AQLLEQSAAE DDRLLTRLIC DEADRIVRLV
ERMELFGDER PVERGPVNVH GVLDQVKRSA QSGFARHIRF VENYDPSLPP VLGNRDQLIQ
VILNLVKNAA EAIGADAVDG EITLSTAFRT GLRLQVPGSR ERVSLPIEVA VRDNGPGVSA
DLLPDLFDPF VTTKAQGSGL GLALVAKIVG DHGGIVECDP APRRTTFRVL LPMSHARDGR
ESAPDVE