Gene Mnod_6461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6461 
Symbol 
ID7306002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6553197 
End bp6554405 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content63% 
IMG OID643604041 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002501542 
Protein GI220926240 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGAA AAGCCGTTTT GATCTTGGCT CTGGCGGGCA CGTTGCTCCC CGGCCTCGCG 
TCAGCCCAGG ATAAATCGAT CAGGATCGGT GTGCTGAACG ACCAGTCCGG TCCCTATGCG
GACTTCCAGG GCATCGGCTC GGTGATCGCG GCGCAGATGG CCGTCGAGGA TTACGGCGGC
ACGGTCGCCG GCCGGAAGAT CGACGTGGTT TCCGCCGACC ATCAGAACAA GACAGATGTC
GGCGCCAACA TTGCGAGAGC CTGGATCGAT CGCGACGGGG TCGACCTCAT CGTCGATGTT
CCGAACTCGG CCGTTGCGCT TGCGGTCAGC AATATCGCTC GCGAGAAGAA CAAGGTCCTG
ATCGGATCAG GGGCGGGCAG CGCGGAACTG ACCGGACGCC AATGCTCTCC GAATACGGTT
CATTGGACTT ACGACACCTG GTCCCTCGGT CACTCGATCG CCCATGCGGT GGTTCAGCGC
GGAGGCAAGA ATTGGTTCTT CCTCACGGCT GATTACGCCT TCGGGCACGA CCTCGAGCGG
CAAGCCAGCG AACAGGTGCA GAAGGACGGG GGCACGGTGC TCGGCACGGC CCGCCACCCG
GTCGGAACCC CGGATTTCTC GTCGTTCCTG CTGCGCGCCC AGAGCTCGGG CGCGCAGGTG
CTGGGCTTGG CTAATGCCGG TGCGGATGAG ACGACCGCGA TCAAGCAGGC CGTGGAATTT
GGGCTTACGC AGCAGATGAG CCTGGTCGGG CTTGTCTTCG ACCTGAACAA CGTCCCGGCG
CTTGGTATGC AGACGGCTCA GGGCATCCTG ACCGTCAACG CCTGGTATTG GGACCTGAGT
GATCCGTCGC GGGAGTTCGC CAAACGGTTT GCGGCTCGTC ATCCGAAGCG CGACATGCCG
AACCACCATC AGGCAGGCGT TTACGCGGGG GTGCTTCACT ACCTGAAGGC GGTCGACAAG
GCCGGCAGCG CCGAGAACGG CAAGGCCGTT GTCAGTGCCA TGAAGGCCTT GCCCACCGAC
GATCCGCTGT TCGGGAAGGG TAGCGTGCGG CAGGACGGGA GGGCGATCCA CCCCATGTAC
CTGCTTCAGG TGAAGACGCC CGAACAGTCG AAGAGCACCT GGGACGTGTT CAACGTGCTA
ACGACCATTC CGGGCGAGGA TGCATTCCGG CCGCTAGAGG CGGGCGGGTG CCCTCTGGTG
CAGAAATGA
 
Protein sequence
MKRKAVLILA LAGTLLPGLA SAQDKSIRIG VLNDQSGPYA DFQGIGSVIA AQMAVEDYGG 
TVAGRKIDVV SADHQNKTDV GANIARAWID RDGVDLIVDV PNSAVALAVS NIAREKNKVL
IGSGAGSAEL TGRQCSPNTV HWTYDTWSLG HSIAHAVVQR GGKNWFFLTA DYAFGHDLER
QASEQVQKDG GTVLGTARHP VGTPDFSSFL LRAQSSGAQV LGLANAGADE TTAIKQAVEF
GLTQQMSLVG LVFDLNNVPA LGMQTAQGIL TVNAWYWDLS DPSREFAKRF AARHPKRDMP
NHHQAGVYAG VLHYLKAVDK AGSAENGKAV VSAMKALPTD DPLFGKGSVR QDGRAIHPMY
LLQVKTPEQS KSTWDVFNVL TTIPGEDAFR PLEAGGCPLV QK