Gene Mnod_5581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5581 
Symbol 
ID7307008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5695402 
End bp5695947 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content71% 
IMG OID643603211 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002500726 
Protein GI220925424 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGCG TCGAACCCGA GATGCGCGCG CTCCTGCTCG GCGCGATCCC GGCCTTGCGG 
GCCTTCGCCT TCTCGCTCAC CCGCGACATC GACCGCAGCG ACGACCTCGT CCAGGAGACG
CTGGTTCGCG CCTGGACCAA GGCGGACAGC TTCCGGCGCG GGACCAACCT GACCGCATGG
CTGTTCACCA TCCTGCGCAA CCTGTTCTAT TCCGAGCAGC GCAAGCGCCG CCGCGAGGTC
GAGGATGCGG ACGGCGTGCG GGCCGCGCGG CTCTCCGTCC TGCCCGCCCA GGAGGCCCGC
CTCGAATTCG ACGCCTTCCG GGTCGCGCTG GACGGCCTGC CGGCCAATCA GCGGGAGGCC
CTGATCCTCG TGGGAGCGCA GAACTTCACC TATGAGGAGG CGGCGGCCAT CTGCGGCGTC
GCCGTCGGCA CGATCAAGAG CCGGGTCAGC CGCGCGCGGA TGCGGCTCGT CGCGGAGCTG
GGAATGGGCG GCCCCGACGA CATCGGCAGC GACGCCGCCA CGCGGGCTGC CCTGGGGCAA
TCCTGA
 
Protein sequence
MTGVEPEMRA LLLGAIPALR AFAFSLTRDI DRSDDLVQET LVRAWTKADS FRRGTNLTAW 
LFTILRNLFY SEQRKRRREV EDADGVRAAR LSVLPAQEAR LEFDAFRVAL DGLPANQREA
LILVGAQNFT YEEAAAICGV AVGTIKSRVS RARMRLVAEL GMGGPDDIGS DAATRAALGQ
S