Gene Mnod_5563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5563 
Symbol 
ID7306990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5678004 
End bp5679563 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content74% 
IMG OID643603193 
Productpeptidase S10 serine carboxypeptidase 
Protein accessionYP_002500708 
Protein GI220925406 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2939] Carboxypeptidase C (cathepsin A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGCA TCCTGATGCT GCTCGGGGCC CTCGCCGCGG CGGCGCCGCT GCCCGCGCTC 
GCGCAGCCGC GGCCGCCCGA TGCGCGCCAA GTCGAGGCGC GCCAAGCCGA GGCCCGCCCG
TCGGAACGCC AGCCCGAGGG GCGGCGGCTG CCGCCCGATG CGGTGACGCA GCACAGCCTG
ACGCTGTCGG ACGGGCGCAG CCTCGTCTTC ACGGCGACGG CCGGCAGCCT CGCCCTCGTG
GACGAGGGCG GCAAGCTCCA GGCGGAGATC GCCTTCACGG CCTACACCCT GCCGGACCGG
GAGCGCGTCG CCCGGCCGGT CACCTTCGCG CTCAATGGCG GGCCGGGCGC GTCCTCCGCC
TATCTCAACC TCGGTGCGGT CGGCCCCTGG CGCCTGCCCC TCGACGGGAC CAGCATCAGC
CCCTCGGCGG CCCCGGTGCC GGTGCCGAAC GACGAGACCT GGCTCGACTT CACCGATCTC
GTCTTCCTCG ATCCGGTCGG CACCGGCTAC AGCCGCGCCG CGGGGGACGA TGCCAAGCGC
TACTTCTCGG TCGATGCCGA CGCCTCGATC CTCGCTTCCG CGATCGCCCG CTGGCTGCGC
ACCAACGACC GCATGGCCTC GCCGAAATTC TACCTCGGGG AGAGCTATGG CGGCTTCCGC
GGCCCGCTCA TCGCCCGCAA GCTGCAGGAC GATATCGGCA TCGGGCTGTC GGGGCTGGTG
CTGCTCTCGC CGGTCCTCGA TTTCGGCTGG CTGCAGCCGC CGCGCCACAA CCCGCTCGGG
GACGTCGCGC GGCTCCCCTC GCTCGCGGCG GCCGGCCTCG AGCGCCGCGG CGGCACCCCC
GACCCCAAGG CGATGGCGGA GGCCGAGGCC TACGCGACCG GCGAGTACCT GTCCGACCTG
CTGCGCGGCC CCGAGAACGG CGAGGCCCGC GACCGGCTCG GCCGGCGCGT CGCCGCCCTC
ACGGGGCTCG ATCCGGAGCT GGTGCGGCGG CAGGCCGGGC GCATCTCCCC GGGCAGCTTC
CAGCGCGAGA GCGGGCGCCC CGAGAGGCGG GTCGCCAGCG CCTACGACAC CGGGGTCACC
GGCTGGGATC CGGAGCCGAA TGCCGCCCAT GCGGGCTTCG AGGACCCGCT CCTCTCGGCC
ATGCAGGCGC CGCTGTCGAG CGCGATGGTC GACCTCTATG CCCGCACCCT GAACTGGCGG
GTGACCAACC TGCGCTACGA ACTCCTCAAC ACGAGCGTGA ACCGGACCTG GAACTGGGGC
TCGGGCCGCA CGCCGCCGGA GGTGGTGAGC GAGCTGCGCC AGGCGCTCGC CCTCGACGGG
TCGCTGCGGG TGCTCGTCAC GCATGGCTAC ACGGATCTCG TCACCCCGTA TTTCGCCTCG
AAGCTGATCC TCGACCAGAT GCCGGCCTAC GGGCCGGGCC GGCGCCTCAG CTTGGCGGTT
TTCCCCGGCG GCCACATGTT CTATTTCCGC CAGGCCTCGC GGGCGGCGCT CCGGGGCGAG
GCGCTGCGCC TCTACGAGGC GGCGCTGGCT TCACGACAGG GAACCGGCGA GGGACGATGA
 
Protein sequence
MIRILMLLGA LAAAAPLPAL AQPRPPDARQ VEARQAEARP SERQPEGRRL PPDAVTQHSL 
TLSDGRSLVF TATAGSLALV DEGGKLQAEI AFTAYTLPDR ERVARPVTFA LNGGPGASSA
YLNLGAVGPW RLPLDGTSIS PSAAPVPVPN DETWLDFTDL VFLDPVGTGY SRAAGDDAKR
YFSVDADASI LASAIARWLR TNDRMASPKF YLGESYGGFR GPLIARKLQD DIGIGLSGLV
LLSPVLDFGW LQPPRHNPLG DVARLPSLAA AGLERRGGTP DPKAMAEAEA YATGEYLSDL
LRGPENGEAR DRLGRRVAAL TGLDPELVRR QAGRISPGSF QRESGRPERR VASAYDTGVT
GWDPEPNAAH AGFEDPLLSA MQAPLSSAMV DLYARTLNWR VTNLRYELLN TSVNRTWNWG
SGRTPPEVVS ELRQALALDG SLRVLVTHGY TDLVTPYFAS KLILDQMPAY GPGRRLSLAV
FPGGHMFYFR QASRAALRGE ALRLYEAALA SRQGTGEGR