| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5467 |
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| Symbol | |
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| ID | 7306897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | - |
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| Start bp | 5565806 |
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| End bp | 5567290 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643603099 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_002500614 |
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| Protein GI | 220925312 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.201334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGC CCCTCTGGAC CCTCGATGCC GTCCTGGCCG CCACCGGCGG CACTCTGGCC
GCCGCAGGCG ACGATGCTGC GGGACGCGAC GGCGCGGCGC AGCCCGTTGC CGGGCTGTCC
ATCGACACCC GCACCCTGAA GGTCGGCGAT CTCTTCTTCG CCATCCGCGG GGAGACTCGC
GACGGCCACG ATTTCGTGCG CGATGCGCTC GCCCGCGGGG CGGGGGCGGC GGTGGTGTCG
CAGGCCCGCG CCGCCGAGCT TGCCGGATCC GGGCCGCTCG TCGTGGTGCC GGAGGCGGGG
GACGATCCGG TCCTAGCGGC CATGCGGGCG CTCGCGGCCG CGGCGCGGGC GCGCAGCGCC
GCCCGGGTCC TCGCGGTGAC GGGCTCGGTC GGCAAGACCG GCACCAAGGA GGCCCTGCGC
CACGTCCTCG CCGCGCAAGG GACCACCCAC GCCTCGGTCG CCTCCTACAA CAACCATTGG
GGCGTGCCGC TCACCCTCGG CCGGATGCCG GCGGGGAGCG CCTTCGGGGT GTTCGAGATC
GGCATGAACC ATGCGGGCGA GATCGCCCCG CTCGCCCGGC TGGTGCGCCC CGAGATCGCC
ATCGTGACCA CGGTCGAGCC GGTCCATATC GAGCATTTCC GCTCGCTCTC CGGGATCGCC
GACGCCAAGG GCGAGATCTT CTGCGGCCTG GAGCCGGGCG GGATCGCGAT CCTCAACCGC
GACAACCCGC ATTTCGAGCG CCTCTCCGCG CATGCCCTCG CCTCGCGGGC CGGGCGCATC
GTGAGTTTCG GCGAGCACCC GCAGGCGGAT GTGCGGGCCG AGCGCATCGT CATGCGCCCC
GACCTCTCGA TCGTCGATGC GAGCGTGCTT GGGGTTCCGG TCACCTACCA GCTCGGCACG
CCGGGGCGCC ACACGGCGCT GAACTCCCTC GCCGTGATGG CGGCGGTGCA TGCGCTCGGG
GCCGACCTTG CGCTCGCGGC GCTCTCGCTG GCGCAGCTGC ACCCGCCGGT GGGCCGGGGC
GAGCGCACTT TGCTGCGGCT GCGCGAGGGC GAGGCGCTGC TCGTCGACGA GAGCTACAAC
GCCAATCCGG CCTCCGTGCG CGCGGCCCTT GCGACCCTCG CCGGGATCGA GATCCGGGGC
CAAGGCCGGC GCATTGCGGT GCTCGGCGAC ATGCTGGAGC TCGGCAGCGA GGCGCCCCGC
CTGCATCGGG AGCTGGCGGC TAGCGTCGAG CAGCACGGCA TCGACCTCGT CTTCGCGGCC
GGGCCGATGA TGGCCGAATT GTTCGAGTCG TTGCCGGCCG GCACGCGCGG CGTCGCCGCC
CCGACCTCCG CCGAACTCCT CGATGCGGTG CTGTCCGAGA TCCGCCCCGG CGACGCGGTG
ATGATCAAGG GCTCGAACAG CATTCGCATG GGCCGGATTG TCGAGGCCCT CAAAGCCCGC
TACGGGGGCG CCGCAGACAG CCTCGCGGCC GGTCGACCGA ACTGA
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| Protein sequence | MTEPLWTLDA VLAATGGTLA AAGDDAAGRD GAAQPVAGLS IDTRTLKVGD LFFAIRGETR
DGHDFVRDAL ARGAGAAVVS QARAAELAGS GPLVVVPEAG DDPVLAAMRA LAAAARARSA
ARVLAVTGSV GKTGTKEALR HVLAAQGTTH ASVASYNNHW GVPLTLGRMP AGSAFGVFEI
GMNHAGEIAP LARLVRPEIA IVTTVEPVHI EHFRSLSGIA DAKGEIFCGL EPGGIAILNR
DNPHFERLSA HALASRAGRI VSFGEHPQAD VRAERIVMRP DLSIVDASVL GVPVTYQLGT
PGRHTALNSL AVMAAVHALG ADLALAALSL AQLHPPVGRG ERTLLRLREG EALLVDESYN
ANPASVRAAL ATLAGIEIRG QGRRIAVLGD MLELGSEAPR LHRELAASVE QHGIDLVFAA
GPMMAELFES LPAGTRGVAA PTSAELLDAV LSEIRPGDAV MIKGSNSIRM GRIVEALKAR
YGGAADSLAA GRPN
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