Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_5368 |
Symbol | |
ID | 7301957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 5449461 |
End bp | 5451194 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643603000 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_002500516 |
Protein GI | 220925214 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0341444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCGC GTCACACCAT CGACAAGTCG AAGCTGCCGA GCCGCTATGT CACCGAGGGG CCGGCCCGGG CGCCGCATCG CTCGTATCTC TATGCGATGG GGCTGACGCG GGAGCAGATC CACCAGCCGC TGGTGGGCGT CGCCTCCTGC TGGAACGAGG CCGCCCCCTG CAACATCGCG CTCATGCGCC AGGCGCAGGC GGTGAAGAAG GGCGTCGCCG CCGCGGCCGG TACCCCGCGG GAATTCTGCA CCATCACGGT CACCGACGGC ATCGCCATGG GCCACCGGGG CATGCGCGCC TCGCTGCCCT CCCGGGAGGT CATCGCCGAT TCCGTCGAGC TCACCATGCG GGGCCACGCC TACGACGCCC TGGTGGGGCT CGCGGGCTGC GACAAGTCCC TGCCCGGCAT GATGATGGCG ATGGTGCGCC TGAACGTGCC GTCGATCTTC ATCTATGGCG GCTCGATCCT GCCCGGCTCC TTCCGCGGGC GGCCGGTCAC GGTCCAGGAC CTGTTTGAGG CGGTCGGCAA GCACTCCGTC GGCCAGATGA GCGACGAGGA TCTGGACGAG CTGGAGCAGG TCGCCTGCCC GTCGGCCGGC GCCTGCGGGG CGCAGTTCAC CGCCAACACG ATGGCGACCG TCTCCGAGGC GATCGGCCTC GCGCTGCCCT ATTCGGCCGG CGCGCCCGCT CCCTACGAGA TCCGCGACAA GTTCTGCGCG GCGGCCGGCG AGATGGTGAT GGATCTCCTC GCCAAGAACA TCCGCCCGCG CGACATCATC ACCCGCAAGG CGCTGGAGAA CGCCGCCACG GTGGTCGCCG CCTCCGGCGG CTCGACCAAT GCGGCGCTGC ACCTGCCGGC CATCGCCCAC GAGGCGGGCA TCGTCTTCGA CCTGTTCGAC GTCGCCGAGA TCTTCCGGCG CACGCCCTAC ATCGCCGACC TCAAGCCGGG CGGGCGCTAC GTCGCCAAGG ACCTGTTCGA GGCCGGCGGC ATCCCGCTCC TGATGAAGAC CCTGCTGGAC CACGGCTTCC TGCACGGCGA CTGCATCACC GTGACCGGCC GCACCATCGC CGAGAACCTC GCCAAGGTGG CCTGGAACCC GGACCAGGAC GTCGTGCGGC CGGCCGACAC CCCGATCACC CCGACCGGTG GCGTGGTCGG CCTCAAGGGC AACCTCGCCC CCGAGGGCGC GATCGTGAAG GTCGCCGGCA TGCCGGCCGA CCGCCAAGTA TTCGCCGGCC CGGCCCGCGT CTTCGACAAC GAGGAAGCCT GTTTCGAGGC GGTGCAGAAC CGCCAGTACA AGGAGGGCGA CGTCCTCGTC ATCCGCTACG AGGGCCCGAA GGGCGGCCCC GGCATGCGCG AGATGCTGGC GACCACCGCC GCCCTCTACG GCCAGGGCAT GGGCGACAAG GTCGCGCTCA TCACGGACGG CCGCTTCTCG GGCGCGACCC GCGGCTTCTG CGTCGGCCAT GTCGGGCCCG AGGCCGCAAT CGGCGGCCCG ATCGGCCTTC TCAAGGACGG GGACATCATC CGGCTCGACG CGATCCAGGG CATCCTCTCG GTCGATCTCT CCGACGAGGA ACTGGCCGAG CGCCGCAAGG CCTGGACCCC GCGCGCGAAC GAGGCGACCT CCGGCTATCT CTGGAAATAC GCGCAGACCG TCGGCCCGGC GGTGACCGGC GCCGTGACGC ATCCGGGCGG AGCCCAGGAG ACGCTCACCT ATGCGGACAT CTGA
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Protein sequence | MDARHTIDKS KLPSRYVTEG PARAPHRSYL YAMGLTREQI HQPLVGVASC WNEAAPCNIA LMRQAQAVKK GVAAAAGTPR EFCTITVTDG IAMGHRGMRA SLPSREVIAD SVELTMRGHA YDALVGLAGC DKSLPGMMMA MVRLNVPSIF IYGGSILPGS FRGRPVTVQD LFEAVGKHSV GQMSDEDLDE LEQVACPSAG ACGAQFTANT MATVSEAIGL ALPYSAGAPA PYEIRDKFCA AAGEMVMDLL AKNIRPRDII TRKALENAAT VVAASGGSTN AALHLPAIAH EAGIVFDLFD VAEIFRRTPY IADLKPGGRY VAKDLFEAGG IPLLMKTLLD HGFLHGDCIT VTGRTIAENL AKVAWNPDQD VVRPADTPIT PTGGVVGLKG NLAPEGAIVK VAGMPADRQV FAGPARVFDN EEACFEAVQN RQYKEGDVLV IRYEGPKGGP GMREMLATTA ALYGQGMGDK VALITDGRFS GATRGFCVGH VGPEAAIGGP IGLLKDGDII RLDAIQGILS VDLSDEELAE RRKAWTPRAN EATSGYLWKY AQTVGPAVTG AVTHPGGAQE TLTYADI
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