Gene Mnod_5238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5238 
Symbol 
ID7306664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5307858 
End bp5309651 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content69% 
IMG OID643602869 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002500387 
Protein GI220925085 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAGCT ACAAGGCGCC CGTGGAGGAT GTCCTGTTCC TCCTCAACGA CGTGTTCGGG 
TTCGAGCGCT ACAGCAACCT GCCGGGCTTC TCGGATGCGA CGCCGGACGT GGTCGAGGCG
ATCCTCACCG AAGGCGCCAA GCTCTGCGAG GAGGTGCTGG CGCCCCTCAA CCTCCCGGGC
GATGCCGAGG GCTGCACCCG GCATCCGGAC GGCTCGGTCA CCACGCCGAA GGGGTTCAAG
GCCGCCTACG CGGCTTATGC GGGCGGCGGC TGGACCGGGC TGTCGATGCC GGCCGAGTAT
GGCGGCCAGG GCCTGCCCGC GACGATCAAC AGCGCGATCC AGGAATTCGT CTCCTCGGCC
AACGTCGCCT TCGGGATGTA TCCGGGCCTG ACGCAGGGCG CGATGGCGGC CCTGCTCGTC
CACGGCTCGG CGGAGCAGAA GCGGACCTTC CTGCCGAAGA TGACCGAGGG GGTCTGGACC
GGCACCATGA ACCTGACCGA GCCGCATTGC GGCACGGATC TCGGCCTCCT GAAGACCCGG
GCGGTGCCGA ACCCGGACGG CTCCTACAGC ATCACCGGCA CCAAGATCTT CATCTCGGCC
GGCGAGCACG ACCTGTCGGA AAACATCATC CACCTCGTGC TCGCCCGCAT CGAGGGCGCC
CCGGCCGGCA CCAAGGGCAT CTCGCTCTTC GTTGTGCCGA AGCTCCTGGT GAAGGCGGAC
GGTTCGCTGG CTGAGCGCAA CGGCGTGTCC TGCGGCTCGA TCGAGCAGAA GATGGGCATC
CACGCCAACG CGACCTGCGT GATGAACTAC GACGGAGCCA GGGGCTGGCT CCTCGGCGAG
GCGAATCGCG GCCTCAACGC GATGTTCGTG ATGATGAACG AGGCGCGGCT CGCCGTCGGC
ATCCAGGGAC TCGGCCTGTC GGAGGCCGCC TACCAGAACG CCGTCGCCTA TGCGAAGGAC
CGGCTCCAGG GCCGCGCCCT CACCGGCGCG CAGGCGCCCG ACCAGCCCGC CGACCCGATC
ATCGTGCATC CGGACGTGCG CCGCACGCTC CTGTCGATCC GCGCCTTCAA CGAGGCCGCC
CGCGCCCTGG TGATGTGGAC GGCGCTCCAG GCGGATGTGG CGCACCGCGC CACCGACCCC
GCCGAGCGGC AGGCGGCCGA GGACCATCTG GGCCTGATGA CCCCGGTGGT GAAGGGCGTG
CTGACCGATC GGGGCTTCGC CAATGCGGTA GAGGCCCAGC AGGTATTCGG CGGCCACGGC
TATATCGAGG AATCGGGGAT GTCGCAGTTC GTGCGCGACG CCCGCATCGC CCAGATCTAC
GAGGGGGCGA ACGGCATCCA GGCCATGGAC CTCGTCGGCC GCAAGCTGCC CCGCGACGGC
GGCCGGGCGA TGATGCGCTT CCTTCAGGAG GTGGAGACCT TCTGCAGGGA GAACGGTGCC
GACGAGACCC TGAAGGGCTA TGTCGGCCCG CTCGCCCAGG CGCTCGGCGA TCTGCAGAAG
GCCACGATGT GGCTGATGCA GAACGCCATG GCCAAGCCCG ACAATGCGGG GGCTGCCGCC
ACCGACTACA TGCACCTGAT GGGCCTCGTG GCGCTGGGCT ACATGTGGGC GCGCATCGCC
AAGGCGGCGG CGGCGCGGAA GGCGGAGGGC ACCAGCATCG GCGCCCGCAT GGACGCCAAG
CTGATGACCG GCCGCTTCTA CATGGAGCGC GTGCTGCCCG AGACCGCGAC CCGGCTCGCC
CGCATCTCGG CCGGCGCGGA GGCCGTCATG GCGGTGCCCG CCGAGATGTT CTAG
 
Protein sequence
MPSYKAPVED VLFLLNDVFG FERYSNLPGF SDATPDVVEA ILTEGAKLCE EVLAPLNLPG 
DAEGCTRHPD GSVTTPKGFK AAYAAYAGGG WTGLSMPAEY GGQGLPATIN SAIQEFVSSA
NVAFGMYPGL TQGAMAALLV HGSAEQKRTF LPKMTEGVWT GTMNLTEPHC GTDLGLLKTR
AVPNPDGSYS ITGTKIFISA GEHDLSENII HLVLARIEGA PAGTKGISLF VVPKLLVKAD
GSLAERNGVS CGSIEQKMGI HANATCVMNY DGARGWLLGE ANRGLNAMFV MMNEARLAVG
IQGLGLSEAA YQNAVAYAKD RLQGRALTGA QAPDQPADPI IVHPDVRRTL LSIRAFNEAA
RALVMWTALQ ADVAHRATDP AERQAAEDHL GLMTPVVKGV LTDRGFANAV EAQQVFGGHG
YIEESGMSQF VRDARIAQIY EGANGIQAMD LVGRKLPRDG GRAMMRFLQE VETFCRENGA
DETLKGYVGP LAQALGDLQK ATMWLMQNAM AKPDNAGAAA TDYMHLMGLV ALGYMWARIA
KAAAARKAEG TSIGARMDAK LMTGRFYMER VLPETATRLA RISAGAEAVM AVPAEMF