Gene Mnod_5153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5153 
Symbol 
ID7302331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5215494 
End bp5216243 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content70% 
IMG OID643602784 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002500302 
Protein GI220925000 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACT CTCCCTCTAC CGGCCGCATC AAGCCGGTTC CGGCATCGCC CCCGACCCTT 
CCCGCGGAGG TGCAGGAGCA TCTCGGCCGC CAGTTGCGCG AGGCTTATGC GGCACTCGGC
GAGAGCGAGG CCCCTGCCGC CTTCACGGAC CTGCTCGCCC GCCTCGAGGC CGCGCTCGCC
GCCCTCGGTG CTCCGAGCCA GGACCGCTTC CGCGATGAGC TCCTGGCGGC TGCACCGTCC
CTGCGGCGTT TCGCCCTGAC GCTCACCGCG AATCCCTCCC GGGCCGACGA CCTCGTGCAG
GATACGCTCC TCAAGGCGTG GCAGAGCCGG GATCGCTTCG AGGACGGCAC GAACCTGAGC
GCGTGGCTGT TCACCATCAT GCGCAACGCC TTCTACTCGG AGCACCGCAA GCGCTCCCGG
GAGGTGGAGG ACGGCGAAGG CGTCTATTCC GCGCGCCTGA CTACGGCCCC TAACCAGGGC
GACCGGCTCG ACGTGCAGGA TCTGCAGGCG GCGCTGAACA AGCTCGTGGC CGAGCAGCGC
GAGGCGCTGC TTCTCGTCGC GGTCGGCGAT CTGTCCTACG AGGACGCGGC CGCGCTGATG
CAATGCAAGG TCGGCACGGT GAAGAGCCGC GTCTGCCGCG CGCGCGACAA GCTTGCCGAA
CTCCTCGGCT ACACGGGCGG GGAGCTCGGC GCCGACCGCC TCACCCGCTC GGTCCTCACC
AACAGCAGCC TCATGGCCCT CGAAGGCTGA
 
Protein sequence
MTDSPSTGRI KPVPASPPTL PAEVQEHLGR QLREAYAALG ESEAPAAFTD LLARLEAALA 
ALGAPSQDRF RDELLAAAPS LRRFALTLTA NPSRADDLVQ DTLLKAWQSR DRFEDGTNLS
AWLFTIMRNA FYSEHRKRSR EVEDGEGVYS ARLTTAPNQG DRLDVQDLQA ALNKLVAEQR
EALLLVAVGD LSYEDAAALM QCKVGTVKSR VCRARDKLAE LLGYTGGELG ADRLTRSVLT
NSSLMALEG