Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_5152 |
Symbol | |
ID | 7302330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 5212126 |
End bp | 5215293 |
Gene Length | 3168 bp |
Protein Length | 1055 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643602783 |
Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
Protein accession | YP_002500301 |
Protein GI | 220924999 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.481667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCCAGCT TCTTCATCGA CCGTCCGGTC TTCGCCTGGG TCATCGCCCT GTTCATCTGT CTCGGCGGCA TCCTGGCGAT CCCGATGCTG CCGGTGGCGC AGTATCCGAT CATCGCGCCG CCCTCGATCG CTCTCTCCAC CGCCTATCCG GGCGCCTCGG TGGAGGATCT CTATACGGGC ACGACCCGCC TCATCGAGGA CGAGCTCAAC GGCGCGGCCA ACATCCAGAG CTTCGAATCG GCGAGCGACT CCTTCGGCGT CGTCGAGATT ACTGCGACCT TCGCGCCCGG CACCGACCCG GGCTACGCCT CGGTCGAGGT GCAGAACCGC CTCAAGCGCG TCGAGGCCCG CCTGCCCGCG GAGGTCCGCC AGCAGGGCAT CCTGGTGGAG GAGGCCTCCG CCGCGACCCT CAACATCATC ACCCTGGTCT CGACCGACGG CTCGATGGAC GAGGTCGCGC TCGGGGACTT CCTGATCCGC AACGTCATCA ACGAGATCCG CCGCATCCCC GGCGTCGGGC GCGCCACCCT CTACTCGACG GAGCGCTCTC TGCGCATCTG GGTCGATCCC GACAAGCTGC GCGGCCTGTC GCTCAGCGCC TCCGACGTGA CGAAGGCGAT CCAGAACCAG AACGTCCAGA TCGCCTCGGG CGCGGTCGGC GCCCAGCCGA GCCCCGCGGC CCATGCGGTC AACTTCCCGA TCCTGGTCAA GGGCCAGATG CGCGCGCCGG AGGAATTCGG CGCCATCGTG CTGCGGGCGA ACCCCGACGG CTCGACCGTC CGCCTGCGCG ACGTCGCCCG CATCGAGCTC GGCGGCGAGG ACTACAAGTT CACCACCCGC CTCAACGGCG GCGAGGCGGC GGGCATCTCG GTGACGCTCG CCCCGGACGG CAACGCGCTC GAGACCGCCA AGGCCATCCG GGCCAAGATG GAGGAGCTGT CGCAGTTCTT CCCCTCCAAC GTGAAGTGGG ACATCCCCTA CGACATCACC CCGGCGGTCA AGGCCTCGAT CAAGAAGGTC ATGATGACGC TGGTCGAGGC GGTGGTTCTG GTCTTCATCG TGATGTTCCT GTTCCTGCAG AACATCCGCT ACACCCTGAT CCCGACGATC GTGGTGCCGA TCGCGCTGCT CGGCACCTGC ACGGTGATGC TGCTGGCGGG CTTCTCGGTG AACGTGCTCA CCATGTTCGG CATGGTGCTG GCGATCGGCA TCCTGGTCGA CGACGCGATC GTGGTGGTCG AGAACGTCGA GCGCATCATG AACGAGGAGG GGCTCTCCCC GAAGGAGGCC ACCCGCAAGG CGATGAGCCA GATCACCGGC GCCATCATCG GCATCACGCT GGTGCTCGTC GCGGTGTTCA TCCCGATGGC GTTCTTCCCC GGCTCGGTCG GCATCATCTA CCGCCAGTTC TCGATCGCGA TGGTGACCTC GATCGCCTTC TCGGCGCTGC TCGCGCTCTC GCTGACCCCC GCCCTCTGCG CGACGCTGCT CAAGCCGATC GAGAAGGGCC ACGGCCACGC CAAGAGCGGC TTCTTCGGCT GGTTCAACCG CTTCGTGGAC CGCCAGACGG CGCGCTACGG CCGCGGCGTG GCCTGGGCCA TCGCCAAGTC CGGGCGGATG ATGGCGATCT ACCTCATCCT GGTCGCGGGC GTGGCCTATG CCTTCGTGCG CCTGCCCGAG GGCTTCCTGC CGGTCGAGGA TCAGGGCTTC TTCACCGTCG ACATCCAGAC GCCGCCGGGC TCGTCCTTCA ACCGGACGCT CGCGGCGGTG AAGAAGGTCG AGGAGCACCT CATGGCCCAG CCCGGGGTCG CCACGGTGAC GATCGTCAAC GGCTTCTCCT TCTCGGGGCA GGGCCAGATG ACCTCGCAGG CCTTCGTGAC CCTGAAGGAC TGGTCGGAGC GCGGGCCGGA CCAGTCGGCC GCCGCGCTGG TGGCCGGCAC CAACAAGGCG CTCGCCTCCT ACAAGGACGC GGTGATCCAG GCGCTCGAGC CGCCGCCGAT CGACAATCTC GGCAACGCCT CGGGCTTCAG CTTCCGCCTG CAGGATCGGG CGCAGAAGGG CTACTCGGCC CTGATGGCGG CGCAGGAGCA GCTGCTCTCG CTGGCCCGCA AGAGCCCGGT CCTGAAAAAC GTCTATGTCG AGGGTCTGCC GCCCGCGCCG CAGGCCGAGC TCGTCATCGA CCGCGAGAAG GCGGCGGCGC TCGGCGTGTC CTTCGAGGCC ATCAACGAGA CCATCCAGGT CAATCTCGGC TCGGTCTACA CCAACGACTT CCCCAACCGC GGCAAGATGC AGCGCGTGAT CGTGCAGGCG GATGCAGTGC AGCGGCTCAA CCCGAGCGAC CTTCTGAACT ACGGCGTCAG GAACGCGCAG GGCACCATGG TGCCGATGGC GTCCTTCGCC GACCTGAAAT GGAGCGTCGG CCCGGCCCAG ATCATCGGCT TCAACGGCTA CCAGTCGGTG CGCATCACCG GCGAGCCGGC GGCGGGCTAC ACCTCGGGCG AGGCGATCGC CGAGATGGAG CGGCTGATGG AGCAGTTGCC GAAGGGCTTC GGCTATACCT GGACCGGCCA GTCCCTGCAG GAGAAGCAGG CCGGCTCGCA GGCGACGCTG CTCTTGGCCC TCTCGGTGCT GATCGTGTTC CTGTGCCTCG CGGCGCTCTA CGAGAGCTGG TCGATTCCGC TCTCGGTGAT GCTGGTGATC CCGCTCGGCG TCATCGGCTC GGTCGCCGGC GTGATGCTCC GCGACATGCC GAACGACGTC TATTTCAAGA TCGGCCTCAT CACGATCATC GGCCTCTCGG CCAAGAACGC GATCCTGATC ATCGAGTTCG CCCGCGAGCT CTGGCGTCCC GGCACCAAGC TCGTCACCGC GACGATCGAG GCCTCGCGCC TGCGCTTCCG GCCGATCGTG ATGACCTCGC TCGCCTTCAT CTTCGGCGTC GTGCCGCTCT CCATCGCGAC GGGCGCGGCC TCGAAGAGCC AGCAGGCGAT CGGCACGGGC GTGATGGGCG GCATGATCTC GGCGACGGTG CTCGCGGTGA TCTTGGTGCC GGTCTTCTTC GTGGTGGCGA TGCGCGTCTT CCAGCGCCGC CGCGTGCGGG AGGAGGAGGG GGCCGCGCCC GCCCGCGCCC TGCCGGAATT CGAGCGCGAA CCCGCGCCAC TCACTTAA
|
Protein sequence | MASFFIDRPV FAWVIALFIC LGGILAIPML PVAQYPIIAP PSIALSTAYP GASVEDLYTG TTRLIEDELN GAANIQSFES ASDSFGVVEI TATFAPGTDP GYASVEVQNR LKRVEARLPA EVRQQGILVE EASAATLNII TLVSTDGSMD EVALGDFLIR NVINEIRRIP GVGRATLYST ERSLRIWVDP DKLRGLSLSA SDVTKAIQNQ NVQIASGAVG AQPSPAAHAV NFPILVKGQM RAPEEFGAIV LRANPDGSTV RLRDVARIEL GGEDYKFTTR LNGGEAAGIS VTLAPDGNAL ETAKAIRAKM EELSQFFPSN VKWDIPYDIT PAVKASIKKV MMTLVEAVVL VFIVMFLFLQ NIRYTLIPTI VVPIALLGTC TVMLLAGFSV NVLTMFGMVL AIGILVDDAI VVVENVERIM NEEGLSPKEA TRKAMSQITG AIIGITLVLV AVFIPMAFFP GSVGIIYRQF SIAMVTSIAF SALLALSLTP ALCATLLKPI EKGHGHAKSG FFGWFNRFVD RQTARYGRGV AWAIAKSGRM MAIYLILVAG VAYAFVRLPE GFLPVEDQGF FTVDIQTPPG SSFNRTLAAV KKVEEHLMAQ PGVATVTIVN GFSFSGQGQM TSQAFVTLKD WSERGPDQSA AALVAGTNKA LASYKDAVIQ ALEPPPIDNL GNASGFSFRL QDRAQKGYSA LMAAQEQLLS LARKSPVLKN VYVEGLPPAP QAELVIDREK AAALGVSFEA INETIQVNLG SVYTNDFPNR GKMQRVIVQA DAVQRLNPSD LLNYGVRNAQ GTMVPMASFA DLKWSVGPAQ IIGFNGYQSV RITGEPAAGY TSGEAIAEME RLMEQLPKGF GYTWTGQSLQ EKQAGSQATL LLALSVLIVF LCLAALYESW SIPLSVMLVI PLGVIGSVAG VMLRDMPNDV YFKIGLITII GLSAKNAILI IEFARELWRP GTKLVTATIE ASRLRFRPIV MTSLAFIFGV VPLSIATGAA SKSQQAIGTG VMGGMISATV LAVILVPVFF VVAMRVFQRR RVREEEGAAP ARALPEFERE PAPLT
|
| |