Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_4844 |
Symbol | |
ID | 7307926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 4935844 |
End bp | 4937133 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643602489 |
Product | lytic murein transglycosylase |
Protein accession | YP_002500009 |
Protein GI | 220924707 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00837309 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCATGC GACATTCCGA CCCGAGACGC CGGATCCGGC GCCGCTTCGC GCGGGCAGCC CTGATTCTCG GACTGGTCTG GCCTGGCCTG CCGGCGCACG GCCAGACGGC TGCTCCGCCC GACACCGCAA CCGCCGTCTC TCCGGACGAG CAGGCGGCCT TCGACCGCTG CAAGCAGGAT CTCGCCGCGG AGGCCCGGGC GCGGGGCGTC GCTCAGGCGG TGGTCGCGAG CAGCCTTCAG GACCTGTCGC CCGACCCGCA GGTTCTGACC GCGTCCCGCC AGCAGGCCGA GTTCGAGAAG CCGCTCTGGG ACTACATCGA TGCGGCCGTC ACCGAGACGG CAATCGTCGA TGGGCGCGCC AAGCTCGGCG AGTGGGAGCC GGTCCTCGCC GCGATCGAGA CGGCCTACGG CGTCGACCGC TTCGTCCTGG CGGCGATCTG GGGCATCGAA TCGGGATACG GTGCCGTCCT CGACAAGCCG ACGAAGGTCA GGCCGGTGAT CCGCTCGCTG GCGACGCTGG CCTGCGGCGG CGAGCGCGCG CCCTACTGGC GCGACGAGCT CCTCGCGGCG CTGCAGATCG CCGATCGGGG CGGCATCCCG CTGGATCAAC TGACGGGCTC CTGGGCCGGC GCGATGGGCC ACACGCAGTT CATGCCGACC ACCTATCTGC GCCATGCGGT CGATTTCGAC GGGGATGGCC GGCGCGACAT CTGGCATTCG GTTCCCGATG CGCTCGCCTC GACGGCGAAC GACCTCAAGG CGATGGGCTG GCGCGCCGGG GAGGGCTGGG GCTACGAGGT CGTCCTGCCC GAGGGGTTCG ACTACGCGCT GGCCGACGAG GTCACCGAGC GCCCGCTCGC GGCATGGCAG GCCCTGGGCG TGCGCGTGGC GGGCGGGCAG CCGCCCGCGC CGACCCCGAC GCCGGCCCGG CTCCTGGTTC CGGCCGGTGC GCGGGGGCCC GCCTTCCTGC TCTTGCCCAA CTTCCAGGTG ATCCTGCGCT ACAACACCGC TTTGTCCTAC GCGCTCGCGG TCGCGCATCT CTCCGATCGC CTGCGGGGGG CCGGTTCTCT CGTCCAGCCC TGGCCGCGGG GCGACCATAT GCTGAGCCAG GACGAGCGCA GGGACCTGCA GGCCCGCTTG TCGGAGCGCG GCTTCGATGC CGGCGGCATC GACGGCAAGA TCGGCCCGAA GACACGCCGG GCCATCCGGG TCTACCAGGC CGCCGCGGGG CTGATCCCGG ACGGCTATGC CGACGCGATC CTCCTCGACC GCGTCAGGGC CGGGCGCTGA
|
Protein sequence | MLMRHSDPRR RIRRRFARAA LILGLVWPGL PAHGQTAAPP DTATAVSPDE QAAFDRCKQD LAAEARARGV AQAVVASSLQ DLSPDPQVLT ASRQQAEFEK PLWDYIDAAV TETAIVDGRA KLGEWEPVLA AIETAYGVDR FVLAAIWGIE SGYGAVLDKP TKVRPVIRSL ATLACGGERA PYWRDELLAA LQIADRGGIP LDQLTGSWAG AMGHTQFMPT TYLRHAVDFD GDGRRDIWHS VPDALASTAN DLKAMGWRAG EGWGYEVVLP EGFDYALADE VTERPLAAWQ ALGVRVAGGQ PPAPTPTPAR LLVPAGARGP AFLLLPNFQV ILRYNTALSY ALAVAHLSDR LRGAGSLVQP WPRGDHMLSQ DERRDLQARL SERGFDAGGI DGKIGPKTRR AIRVYQAAAG LIPDGYADAI LLDRVRAGR
|
| |