| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_4033 |
|---|
| Symbol | |
|---|
| ID | 7307485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 4102556 |
|---|
| End bp | 4103746 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643601688 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_002499218 |
|---|
| Protein GI | 220923916 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGCC TCCGCCTGCT CGCCGGGCCG CTCGCCGCGC TGATCCTGCT GCCGCCCGCC
GCCCGGGCAA GCCAGACCGA GGTGCCGGTG CCCGCCGTGA CGGTCGTGGT CGCGGCCGAG
CGCGAGATCG TGGAGCGCAC CGTCGTCACC GGCACCCTGG TGCCGCGCGA CGAGATCATG
GTCTCGCCCG AGATCGAGGG CTGCCGCATC ACCGAACTCC TGGTGGAGGA GGGCGACCGG
GTCGCCCGGG GCGCCGTGCT GGCACGGCTG TCGCGCGAGA TGCTGGACAC CCAACTCGCC
CAGAACGCTG CCGCGATCGC CCGGGCGGAG GCCGCGGTCG ATCAGGCGCG CAGCACCATC
GTGCAGGCCG AGGCCGCGCA GGTGGAGGCC GCCCTCGCGC TCGAGCGCAC CCGCACCCTG
ATGAAGTCCG GCAACGCCAC CGAGGCGCTG CTCGAGCAGC GCGTCTCGGC CGCCCGCTCG
GCGGACGGAC GGCTGGCGGC GGCCCGCAAC GGCCTGTCGA TCGCGGAGGC CGAGCTGCTG
CAGGCCAAGG CCCAGCGCAA GGAACTCGAC CTCAAGCTCG CCCGCACCGA GATCCGCGCG
CCGGAGGGCG GCATCGTCAG CCGCCGCGTG GCGCGCGTCG GGGCGACGGC GAGCGCCTCC
GGCGAGCCGC TGTTCCGTCT GATCGCCCGC GGCGAGATCG AGCTCGAAGG CGAGGTGACC
GAGACCGGCA TCCCGCGGCT CAAGGCCGAG GCCCCGGCCC AGCTCGACCT CGACACGGCG
GACGGGCCGG TCGTGGTGCC GGGCCGCGTG CGCGCGGTCT ATCCGGAGAT CGACCGCGCG
ACGCGCCTCG GCAAGGTCCG CATCCGCCTG CAGCCCGATC CGCGCCTGCG CATCGGCGCC
TTCGCCCGCG GCAGCGTCGA GGTGGCGCGC CGCACCGGCG TCGCCGTGCC GGTCGCCTCG
GTGGTCTACG GCAATGGCGG CGCCACCGTG CTGGTGGTGG CGGGCGACCG GGTCGAGGTG
AGGGCGGTCC GCACCGGCCT CTCGGCCGCG GGCTTCATCG AGATCCGCGA CGGGGTGAAG
GCGGGCGATG CCGTGGTCGC CCGGGCGGGC AGCTTCCTGC GCGACGGAGA CCGGGTCCGG
CCGGTCTTTC CCGCCCAGCA GGCCAGCGCC GACGCCCTCC CGCGCCCCTG A
|
|---|
| Protein sequence | MFRLRLLAGP LAALILLPPA ARASQTEVPV PAVTVVVAAE REIVERTVVT GTLVPRDEIM
VSPEIEGCRI TELLVEEGDR VARGAVLARL SREMLDTQLA QNAAAIARAE AAVDQARSTI
VQAEAAQVEA ALALERTRTL MKSGNATEAL LEQRVSAARS ADGRLAAARN GLSIAEAELL
QAKAQRKELD LKLARTEIRA PEGGIVSRRV ARVGATASAS GEPLFRLIAR GEIELEGEVT
ETGIPRLKAE APAQLDLDTA DGPVVVPGRV RAVYPEIDRA TRLGKVRIRL QPDPRLRIGA
FARGSVEVAR RTGVAVPVAS VVYGNGGATV LVVAGDRVEV RAVRTGLSAA GFIEIRDGVK
AGDAVVARAG SFLRDGDRVR PVFPAQQASA DALPRP
|
|---|
| |