Gene Mnod_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3974 
Symbol 
ID7307426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp4048185 
End bp4048838 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content59% 
IMG OID643601636 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002499166 
Protein GI220923864 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCG ATCCGTCGAT CGTTCTCAAG AATTGGGACC TGCTGGCCCA AGGCCTGCTC 
CTTACCCTGA AATACACGAT CTATACGTGC GCCATCGGCC TTGCCATCGG CCTGTTCGTG
GCACTTCTCC AGCTCACGCC CTGGCGGCTG GTGCGCTGGA TCGGGCGGAT CTGGGTGGAG
TTCTTCCGTA ACATTCCGCT GCTGGTGCTG CTCCTGTGGA CTTATTACGC CATGCCGATC
TTCCTGCAGA TCCAGGTGGC GAAGGAAACG GCGGGCATTC TCGGCCTCGG GTTCTATGCC
AGCGGCTTCT ATGCCGAGAT CCTGCGCGCC GGTGTTCAGT CTATCGACCG TGGCCAGACT
GACGCCTCCT TGGCGCTGGG CATGAGTTAC ATCCAGCGCA TGAGACGCAT CATCCTGCCG
CAGGCGTTGC GCCGGATGGT GCCGCCGCTG GTGGGGCAAA CCATCATGCA GCTCAAGAAC
ACGACGCTGC TCTCCGTGCT GACTATCCCG GATCTGCTTT ACCAAGCGAG CTATATATCT
AGCTTCACCT ATCGACCGAT GGAGGTTTAC ACCGTCATCG GCATCGTCTT TGTCCTCATC
CTGTTCCCTC TGAGCGCCCT GTCACGCCAG TTTGAGCGCA AGGAGGCTGC GTGA
 
Protein sequence
MKFDPSIVLK NWDLLAQGLL LTLKYTIYTC AIGLAIGLFV ALLQLTPWRL VRWIGRIWVE 
FFRNIPLLVL LLWTYYAMPI FLQIQVAKET AGILGLGFYA SGFYAEILRA GVQSIDRGQT
DASLALGMSY IQRMRRIILP QALRRMVPPL VGQTIMQLKN TTLLSVLTIP DLLYQASYIS
SFTYRPMEVY TVIGIVFVLI LFPLSALSRQ FERKEAA