Gene Mnod_3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3704 
Symbol 
ID7307224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3796535 
End bp3797407 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content72% 
IMG OID643601372 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002498914 
Protein GI220923612 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.133607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCCTG ATGCGGCGAC ACGGGTCTTC GAGGCGCAGC GCCTGCGCCT CGTTCGCTTG 
GCCTACCGCA TGCTCGGCTC CGTCGCGGAG GCGGAGGATG CGGTCCAGGA TGCGTGGCTG
CGCTGGCGGC GCGTCGAGGC GGAGGTGGAC GAGCCCGCGG CCTACCTGAC CCGCATCGTC
ACGCGGCTCT GCCTCGACCG GATGAAATCC GCACGGGCGC GCCGCGAGAC CTATGTGGGC
GCGTGGCTTC CCGAACCGCT GATGGGCACG ACGCCGGAGG AGCCCGAGGA CGACCTCACC
CTGACCCTGA TGCTCGCGCT CGAACGCCTC TCGCCGCTCG AACGCGCGGC CTTCCTGCTG
CACGACGTCT TCGGCGTTCC CCTGAACGAG GTCGCCGGCA CGCTCGGGCG GGAGGCGGCG
GCGGTGCGCC AGCTTGCCGT CCGGGCGCGC CGGCATGTCC AGGCGGCGCG CCCGCGCTAC
ACGGTCGAAC GGGCCGAGGC CGAGCGCATC GCGACCGCCT TCTTCGCAGC CTCGCGCGAC
GGCGACACGC AGGCGCTCGG CCGGATGCTG GCCGCGGATG TCGTACTGCA TTCGGATGGC
GGCGGGCGGG TGATCGCCTT CCGCAACCCG ATCGTCGGGA TCGCGCGGGT CCTGCGGCTC
TATGCGGGGC TGCAGCGCAA GCATGGGCCC GCGGTGCCGC AGCTCCTGCG CCCGATCTGG
ATCGACGGCC TTCCCGGCTA TGTCAGCATC GATCGCGGCG CGATCCTGCA GACGACGGCG
CTGGCGATCG AGGACGGGCG CATCGCCGCG ATCTACATCG TGCGCAATCC GGACAAGCTG
CGGCATGTGG GGCGGATCCT GGCCGACGGC TGA
 
Protein sequence
MPPDAATRVF EAQRLRLVRL AYRMLGSVAE AEDAVQDAWL RWRRVEAEVD EPAAYLTRIV 
TRLCLDRMKS ARARRETYVG AWLPEPLMGT TPEEPEDDLT LTLMLALERL SPLERAAFLL
HDVFGVPLNE VAGTLGREAA AVRQLAVRAR RHVQAARPRY TVERAEAERI ATAFFAASRD
GDTQALGRML AADVVLHSDG GGRVIAFRNP IVGIARVLRL YAGLQRKHGP AVPQLLRPIW
IDGLPGYVSI DRGAILQTTA LAIEDGRIAA IYIVRNPDKL RHVGRILADG