| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3380 |
|---|
| Symbol | |
|---|
| ID | 7308746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 3495738 |
|---|
| End bp | 3497141 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643601059 |
|---|
| Product | protein of unknown function DUF107 |
|---|
| Protein accession | YP_002498603 |
|---|
| Protein GI | 220923301 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGACCG CAAAGGCGGC CTTCGTTGCG GCGATGGCAA TCGTCGCTCT GATTGTCTCC
CTCCGTCCCG GTTCAGCGGA GGTGAGCGGC AGTCTTGCAC TGATTATTTC AATCGATAGA
GCGATCGGAC CGGCGTCGGC CAGTTACGTG AAGGACGCCC TGGTGACGGC GCGCGAACGA
CGTGCCGAGA TCATCATTCT GCGGCTGAAT ACACCAGGCG GTCTCAACAC CAGCATGCGC
GAGATTATCC GCGATGTGCT CGCCTCTTCC GTTCCTGTCG TCGGCTACGT CGCTCCCTCC
GGAGCCCATG CGGCAAGCGC CGGGACCTAT ATTCTTTATG CGACGCATAT CGCGGCCATG
GCGCCGGGCA CCAACATCGG CGCGGCGACA CCGGTGCAGA TCGGCGGGCC GATTCCGGGT
CTGCCGGGCG GCATCCCCGA CAAGGATGGC AAAGACAAGA AGGATGGCGG CCGTCAACCC
GAAGCGAAGG ACACCATGAC GGCAAAGGCG ACAAATGATG CCGTCGCTTT CATCCGCAGC
CTCGCCGAGC TGCGTGGCCG CAATGCCGAC TGGGCCGAAA GGGCGGTGCG TGAGGCTGCC
ACCCTCTCGG CCAACGGCGC GTTGCAGGCA AGTGTCATCG ACCTCGTCGC ACGTGATCCG
GCAGAATTGC TGAGGCAGGT CGATGGACGC ACGGTGGAGG TTGCAGGTGG CAAGACGCAA
CGCCTGAACA CGAAGTATGC CATCCTCGAA GCCATCGATC CCGGATGGAT CTCACACTTC
CTCACGATCA TCGCCGATCC CAACGTCGCG TTCATTCTGC TGATGATCGG GATCTATGGG
CTGATCTTCG AATTCATGTC CCCCGGCGCT GTCGCCCCGG GGGTCGTCGG CACGATCTGC
CTGCTGCTCG GCCTTTATTC CCTCAATCTG CTCCCGATCA ACTACGCCGG CTTCGCCTTG
ATGCTGATCG GGATCGCGCT TCTCACCATC GAAGCTTTCA ACCCGACCAT CGTGATCGGC
CTCGGAGGGG TTATCGCCTT TGTGCTGGGA GCGCTGATGC TCTTCAGGGT CGAGGCGCCT
GGCTACCGGC TGTCATGGTG GGTCATCGGC ACCACTGTGG CGGTGTTCGT CGGCTTTGTT
GTCGTCGTGC TCGGCTCGCT TCGCCGCGCC GGCAAGGGTC CGATACGGGT CGGCGCGCAA
GCCATGCGAG GCCTACCTGC CGAGATACTC GACTGGTCCG AGAACGAAGG CCACGTCCTT
GCCCACGGTG AACGCTGGCA AGCGCGCGGC GCCGAAACGT TCAGGCCCGG AGAGACGGTC
GAAGTGGCCA ACATCATCGA TTTGACGCTG GTGGTACGGC GCACGTCAGC TCCGCCGGAG
ACGGAGGCAC AACATGATGC TTGA
|
|---|
| Protein sequence | MQTAKAAFVA AMAIVALIVS LRPGSAEVSG SLALIISIDR AIGPASASYV KDALVTARER
RAEIIILRLN TPGGLNTSMR EIIRDVLASS VPVVGYVAPS GAHAASAGTY ILYATHIAAM
APGTNIGAAT PVQIGGPIPG LPGGIPDKDG KDKKDGGRQP EAKDTMTAKA TNDAVAFIRS
LAELRGRNAD WAERAVREAA TLSANGALQA SVIDLVARDP AELLRQVDGR TVEVAGGKTQ
RLNTKYAILE AIDPGWISHF LTIIADPNVA FILLMIGIYG LIFEFMSPGA VAPGVVGTIC
LLLGLYSLNL LPINYAGFAL MLIGIALLTI EAFNPTIVIG LGGVIAFVLG ALMLFRVEAP
GYRLSWWVIG TTVAVFVGFV VVVLGSLRRA GKGPIRVGAQ AMRGLPAEIL DWSENEGHVL
AHGERWQARG AETFRPGETV EVANIIDLTL VVRRTSAPPE TEAQHDA
|
|---|
| |