Gene Mnod_3326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3326 
Symbol 
ID7301751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3434856 
End bp3436658 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content73% 
IMG OID643601007 
Productlipid A ABC exporter family, fused ATPase and inner membrane subunits 
Protein accessionYP_002498552 
Protein GI220923250 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID[TIGR02204] ABC transporter, permease/ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCCG CCGATACGGC CCGCTCCCGG GCCTCCCTGG GCGCGCTGAA ACCGCTCATT 
CCCTACGCCA TGCGCTACCG CGGCCGCATC GCGGCGGCCC TGGTCGCGCT GATCGCCGCG
GCCGGCGCGA CGCTGATCGT GCCGATCGCG ATCCGGCGCG TGGTCGATCT CGGCTTCTCG
CATGTGGGCG CGGCGATGAT CGACGCCTAT TTCGGGGCGC TGCTCGGCGT CGTGGGCATC
CTCGCGCTGG CGAGCGCCGC GCGCTACTAC TTCGTCGTGA CGCTCGGGGA GCGTGTGATC
GCGGACCTGC GCGCCGCGGT CTTTGCGCGG CTCACCACGC TGGACCCCGC CTTCTTCGAT
CAGGCGCGCA GCGGCGAACT CGTCTCGCGT CTCACCGCGG ATGCCGCGCA GGTGAAGGCG
GTCTTCGGCG TGTCGCTGTC GATCCTCTTG CGCAACGTCT TCCTGTTCCT CGGCGCGGTG
GCCATGATGG TGTGGACGAG CCCGTGGCTC TCCGTCCTGG TGCTCGTCGC GATCCCGATC
ATCGTGTTCC CGCTGATCCT CTCGGGCCGC GGCGTGCGGC GCCGCTCGCG CGCCGCGCAG
GACCGGCTCG CCGATGCCTC CGCCTATGCC ACGGAGGCGG TGGGGGCCGT GCGCACCATG
CAGGCCTTCG GCATGGGGCC GGCGACCGCC GCGCGTTTCG CGGCGGCCTC CGAGGCGGCC
TTCCTGGCGG CGCGCCACTC GGCCCGGGCG CGGGCGCTCC TCACGGGCGT CGCCATCTTC
CTCGTCTCGG CGAGCGTCGT CGGCGTGCTC TGGTACGGTG CGCAGGGCGT GGCGAGCGGC
GTGATGTCGG CCGGCCAGTT GTCGCAGTTC GTGCTCTACG CGGTGTTCGG CGCGAGCGCG
CTGGGGCAGC TCTCGGAGGT CTATGGCGAG CTCACGCTGG CGGCGGGTGC CGCGGAACGG
CTCGGCGAGA TCCTGCACAC CGAGCCCGCC ATTACGGCCC CGGCGCAGCC CGTCGCGCTG
CCGGTTCCGC CGCGCGGCGA GGTGGCCTTC GAGCACGTGC GCTTCTCCTA TCCGGCGCGG
CCGGAGCAAT CGGCCCTTCA GGATCTCAGC TTCCGCGTGG CGCCGGGCGA GCGCGTCGCC
CTGGTGGGGC CGTCAGGCGC TGGCAAGAGC ACGGTGCTGC AGCTGCTCCT GCGCTTCTAC
GATCCCGATT CGGGACAGGT GCGGGTGGAT GGGGTGCCGG TCGACGCGGT CGACCCCGCC
CTGTTGCGGG ACCGGCTCTC GCTCGTGCCG CAGGACCCGA CGGTGTTCAG CGGCAGCGTG
CTCGACAACA TCCGCTACGG CCGGCCGGAG GCCAGCGAGG CCGAGGTGGT GCGGGCCGCC
GAGCAGGCGC ATGCGGATGG CTTCATCCGC GCCCTGCCGC AGGGCTACGC CACACTGGTG
GGCGAGCGCG GCGTCACCCT GTCGGGCGGC CAGCGCCAGC GCATCGCCAT CGCCCGCGCG
ATCCTGAAGG ATGCGCCGAT CCTGCTCCTC GACGAGGCGA CCTCGGCCCT CGATGCGGAG
AGCGAGCGCG CCGTGCAGGC GGCCCTCGAT CTGCTGATGC GCGGGCGTAC CACCCTGGTG
ATCGCCCATC GCCTCGCGAC GATCCGGGCG GCGGACCGCA TTCTCGTGCT CGATGACGGG
CGCGTGGTGG AGGAGGGAAC CCATGAGGGG CTGCTCGCCC GCAACGGGCT CTATGCCCAG
CTGGCGGCGC TCCAGTTCGC CGATCCGGGG GAGGGGGGGC GCGCGCGTCT GGTCGCGGTA
TAG
 
Protein sequence
MDSADTARSR ASLGALKPLI PYAMRYRGRI AAALVALIAA AGATLIVPIA IRRVVDLGFS 
HVGAAMIDAY FGALLGVVGI LALASAARYY FVVTLGERVI ADLRAAVFAR LTTLDPAFFD
QARSGELVSR LTADAAQVKA VFGVSLSILL RNVFLFLGAV AMMVWTSPWL SVLVLVAIPI
IVFPLILSGR GVRRRSRAAQ DRLADASAYA TEAVGAVRTM QAFGMGPATA ARFAAASEAA
FLAARHSARA RALLTGVAIF LVSASVVGVL WYGAQGVASG VMSAGQLSQF VLYAVFGASA
LGQLSEVYGE LTLAAGAAER LGEILHTEPA ITAPAQPVAL PVPPRGEVAF EHVRFSYPAR
PEQSALQDLS FRVAPGERVA LVGPSGAGKS TVLQLLLRFY DPDSGQVRVD GVPVDAVDPA
LLRDRLSLVP QDPTVFSGSV LDNIRYGRPE ASEAEVVRAA EQAHADGFIR ALPQGYATLV
GERGVTLSGG QRQRIAIARA ILKDAPILLL DEATSALDAE SERAVQAALD LLMRGRTTLV
IAHRLATIRA ADRILVLDDG RVVEEGTHEG LLARNGLYAQ LAALQFADPG EGGRARLVAV