| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3221 |
|---|
| Symbol | |
|---|
| ID | 7305443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 3327997 |
|---|
| End bp | 3329370 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643600905 |
|---|
| Product | General substrate transporter |
|---|
| Protein accession | YP_002498450 |
|---|
| Protein GI | 220923148 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCTT CAGTGTCATC CATAGAGAGC ACAACTGCCG ATTCCGGCGA GACCTCAGCA
GCATTCAAGC AACGCTTCAT GCGGCGGCTG ATCGCCGTCC TCATCGGCGG GATGTTCCTC
GACGGCTACA TCCTCGGGAT CATCGGTCCG GTAACCCAGA AGATGACCGA CGATTTGGGC
CTGTCGACGC TCTGGGTAGG TCTGATCGCC GCGGCCCCGT TGTTCGGCAT CTTCATCGGC
TCGCCGCTCG GGGGCTGGGC CACCGACAAA TTCGGCCGCA AGCCGCTGTT CCTGGTGGAC
ATAGCCTTGT TCGTGATCGC CTCGTTCATG CAGTCATTCG CTGGGTTGGT TCAGTTCTTC
GTCGACTCGG CCTGGCAGCT GTTCTTCGTG CGGCTGCTGA TGGGCGTCGC TATCGGCGGC
GAGTACTCCA TCGGCGGGCC ACTGATGTCC GAGTTCGCTC CCGCCCGGCT GCGCGGACGG
CTCTTGGGCA TGACGCTGAT CGCCTGGTAC GCCGGGTTTA TGTTCGCGTT CATCGTGGGT
CACGTGCTGG TGGCGACAAC CGACCTGAGC TGGCGGCTCA TCCTGGGATC GAGCACCGTG
ATCGCAGTGG CCTTGTTCAT CGCCCGGCTC GGCCTGCCCG AATCCCCCCG CTGGCTGTGG
AACCAGGGCC GCCGGGACGA AGCCCGCACC ATTGCCCACC GGTACATGGA AAGCGCTTCC
GACATGACCG ACGTCGAACA TGAGGACATC CGCAAGGGCA GCTTCGGGAT GCTGTTCTCC
CGGCAGTACT GGCGAGCGAC GCTCTTCACA TCCGGGTTCT GGTTCTGCGC CGTCACCCCG
TATTTCGCCA TCGCCACCTT CGCCGACAGC GTGCTGCAGC AATACGGCCT CAGTGGTGGG
CTGGCCGGTG GGGTCGGGCT CTCCGCGCTC GCTCTGCTCG CGGTGGTGAT CACCGTGCTC
TTGATCGACA AGGCCGGCCG GCGTGTCCTG ACCGTGCCGC CGCAATGGCT GTGCGCCGCG
TTACTGGCGG TCATCGGCCT GTGGGCGGGC GCACCGCCGA CCGTCGTACT GATCCTGTTC
CTCGCCTTCT CGTTCTTCAA CGCCATGTAC ACCACGCTGA CCCAGATCTT CCCGGCTGAG
GTTTTCCCGA CTGAAATCCG CGGCATCGGC ACCGGATTCA GCGCCGCTGT CAGCCGGATC
GGCGCTGGCC TCGGCACTTT CCTGCTGCCG TGGTCCATGA CGAACCTCGG CACTTCAACG
ACCATGCTGA TCGCCGCCGG CGTCGCTGCG GTCGGTGCCG GATTGTCGCA GTGGCTGGCT
CCCGAGACGA AGGGGAAGAG CCTCAGCGAG ACGGCCGCTG GGTATTCGCA CTAA
|
|---|
| Protein sequence | MSSSVSSIES TTADSGETSA AFKQRFMRRL IAVLIGGMFL DGYILGIIGP VTQKMTDDLG
LSTLWVGLIA AAPLFGIFIG SPLGGWATDK FGRKPLFLVD IALFVIASFM QSFAGLVQFF
VDSAWQLFFV RLLMGVAIGG EYSIGGPLMS EFAPARLRGR LLGMTLIAWY AGFMFAFIVG
HVLVATTDLS WRLILGSSTV IAVALFIARL GLPESPRWLW NQGRRDEART IAHRYMESAS
DMTDVEHEDI RKGSFGMLFS RQYWRATLFT SGFWFCAVTP YFAIATFADS VLQQYGLSGG
LAGGVGLSAL ALLAVVITVL LIDKAGRRVL TVPPQWLCAA LLAVIGLWAG APPTVVLILF
LAFSFFNAMY TTLTQIFPAE VFPTEIRGIG TGFSAAVSRI GAGLGTFLLP WSMTNLGTST
TMLIAAGVAA VGAGLSQWLA PETKGKSLSE TAAGYSH
|
|---|
| |