Gene Mnod_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3118 
Symbol 
ID7304045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3218420 
End bp3219124 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content69% 
IMG OID643600809 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002498354 
Protein GI220923052 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACCGG CAACGCTTCG AATCGCGGCT GCACCCCGCA CGCACTCGGA CGGACGGACA 
TCTGCTCCCC GCCTGTCTCG CTCAGTTCGG AAGCACCTTG GGTCCGAGTT GCGGGCCTTG
TACGCCACGG TCCTGGAGGT CGAGCCATCG ACCCGGCTGC TCGACCTCAT CACCCGGCTC
ACCGACGCCT TCCCTGAAGG CGAGGCCGAC ACGACATTCC GCAACGACCT TCTCTCAGCC
GTCCCGGCCC TGCATGCCTT CGCCCTGTCC CTTGCCGTAA ACCCCACACG GGCCGAGGAC
CTGGTGCAAG AGACCCTGCT CAGAGCCTGG GAGCACCGCG CCCGGTTCGA GCCCGGCACG
AACTTCAAGG CGTGGCTGTT CACCATCCTG CGCAACCAGT TCTACGGTGA CTGCCGCAAA
CGCAGGCGCG AGGTGGAGGA CGTCGATGGC GTCAAGGCGG GCCAGGTCGT GGCGCCGGCC
GCGCAGGAGG CCAGTTGCGA CCTTCGCCGG GTCTGGGACC ATCTCGGCAA GTTGCCGCCG
CTGCAACGGG AGGCCTTGAT CCTCGTCGCG GCCCAGGGGC TCACCTATGA GGCCGCGGCC
GAGCTGATCG GATGCGAGGT CGGCACCGTG AAGAGCCGGG TCAGCCGCGC GCGCTCCTTT
CTCGCCGGCG CGCTCTGGCC GCAGGAGCGC GCCAGTCCAG CCTGA
 
Protein sequence
MAPATLRIAA APRTHSDGRT SAPRLSRSVR KHLGSELRAL YATVLEVEPS TRLLDLITRL 
TDAFPEGEAD TTFRNDLLSA VPALHAFALS LAVNPTRAED LVQETLLRAW EHRARFEPGT
NFKAWLFTIL RNQFYGDCRK RRREVEDVDG VKAGQVVAPA AQEASCDLRR VWDHLGKLPP
LQREALILVA AQGLTYEAAA ELIGCEVGTV KSRVSRARSF LAGALWPQER ASPA