| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3078 |
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| Symbol | |
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| ID | 7304005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | - |
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| Start bp | 3176689 |
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| End bp | 3178587 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643600777 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_002498322 |
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| Protein GI | 220923020 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCGA TGGCTCAGCT CCAGTCTCTC ACCTTGGACG CCGGCCTTCA TCCGGGCGTC
TCGTCCCTTC GCCGCTCCCT GGCCGTGTCC TGCGATGCGG CGCTCGGCAC TCTAGTCGAG
GCAGTCGCCG CGACCCTGGT CGCGGTCGAG ATCGCGATCC TGTTCTCCGG GATCGTCGCC
CGCTACTGCT TCGATAGCCC GCTCGTGTGG TCGGACGAAC TCGCCTCGAT GCTGTTCCTC
TGGCTCGCCA TGCTGGGCGC GGCCGTGGCG CTCCGGCGCG GCGAGCACAT GCGGATGACC
GCTGTCGTTG CGCTGCTCCC GGGCGGGGTG CAGGCCCTGC TGGAAGTGGT CGCAACCGGA
GCGGCGCTCA CGTTCCTCCT CTGCGTGGCG TGGCCGGCCT ACGAGTTCGC CTTGGAAGAA
CTCTTCATCA CCACGCCGGC CCTCGAGATC ACCAACGCCT GGCGCGCTGC CGCGCTTCCG
ACCGGCCTTG GCCTGATGGC CGCGTTCGCC GCACTGCGTC TGTTGCGCAC CGCCTCGCTG
CGCCTCGTGG CCCTCGGCCT CGTGGCCGTC GCTGCGGTCG TTGCCGTGTT CTGGCTGAGC
GAACCGGTTC TTCGCCAGCT CGGCAACCTC AATCTGCTGA TCTTCTTCGT CGGGGTGGCG
GGTGCCTGCG TTTTCAGTGG CGTGCCGATC GCCTTCGCGT TCGGGCTCGC CGTGCTCGGT
TACCTAGCCC TGGCGACGAG CACGCCGCTC ATGGTCCTGG TCGGGCGGAT CGACGAGGGC
ATGAGCCACC TCATCCTGCT GTCCGTACCA CTGTTCGTGT TCCTCGGCTT GCTCATCGAG
ATGACCGGCA TGGCTCGTGC CATGGTCGGC TTCCTGGCAA GCCTGCTCGG CCACGTGCGT
GGCGGCCTGC ATTACGTGCT GATCGGGGCG ATGTACCTCG TCTCAGGCAT CTCCGGATCC
AAGGCGGCCG ACATGGCGGC GGTGGCCCCG GTGCTGTTTC CCGAGATGAA GGCGCGCGGG
GCCAAGGAGG GTGACCTCGT CGCGCTCCTG TCGGCGACCG GAGCCCAGAC CGAAACCATC
CCCCCGAGTC TCGTGCTCAT CACCATCGGG TCGGTCACCG GCGTGTCGAT CGCGGCCCTG
TTCACCGGTG GCCTGCTGCC GGGGGTCGCG CTCGCGGTGC TGCTCTGCTT CGTCGTCTGG
CACCGCTACC GCAACGAGGA CCTCAGTCAC GTCAGGCGTG CCACCAAGAG CGAGATCGGG
CGGGCCTTCG TCATTGCCTT TCCGGCCATT GCTCTCCCGT TCGTGATCAG GGCGGCGGTG
GTGGAGGGTG TCGCGACCGC CACCGAGGTT TCGACCATCG GCATCGTCTA CGCGGTGCTG
GCCGGCCTGC TCATCTACCG GCAATTCGAC TGGCGGCGTC TCAAGCCGAT GCTGATCGAG
ACGGCATCCC TGTCGGGAGC GATCCTGCTG ATCATCGGCA CCGCCACCGG CATGGCCTGG
GGTTTGACGC AGTCGGGGTT CTCGCGCTCG CTCGCGGCGG CCATGACCGG ACTTCCCGGT
GGCGCCGTGA CCTTCATGGC CGTGTCGATC GTGGCGTTCG TGGTGCTCGG CTCCGTGCTC
GAAGGCATTC CGGCCATCGT GCTGTTCGGG CCGCTCCTGT TCCCCATCGC CAGGGCTGTG
GGCATCCACG AGGTGCACTA CGCCATGGTG GTGATCCTGG CGATGGGGAT CGGTCTGTTC
GCCCCACCCT TCGGTGTCGG CTACTACGCC GCCTGCGCGA TCGGGCGCGT CAACCCGGCC
GATGGTATTC GCCCGATCTT GGGATACGTT CTGGCCCTGT TCATCGGCAC AATCATCGTG
GCTGCCGTTC CCTGGATATC GATCGGCTTC CTCAACTGA
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| Protein sequence | MTAMAQLQSL TLDAGLHPGV SSLRRSLAVS CDAALGTLVE AVAATLVAVE IAILFSGIVA
RYCFDSPLVW SDELASMLFL WLAMLGAAVA LRRGEHMRMT AVVALLPGGV QALLEVVATG
AALTFLLCVA WPAYEFALEE LFITTPALEI TNAWRAAALP TGLGLMAAFA ALRLLRTASL
RLVALGLVAV AAVVAVFWLS EPVLRQLGNL NLLIFFVGVA GACVFSGVPI AFAFGLAVLG
YLALATSTPL MVLVGRIDEG MSHLILLSVP LFVFLGLLIE MTGMARAMVG FLASLLGHVR
GGLHYVLIGA MYLVSGISGS KAADMAAVAP VLFPEMKARG AKEGDLVALL SATGAQTETI
PPSLVLITIG SVTGVSIAAL FTGGLLPGVA LAVLLCFVVW HRYRNEDLSH VRRATKSEIG
RAFVIAFPAI ALPFVIRAAV VEGVATATEV STIGIVYAVL AGLLIYRQFD WRRLKPMLIE
TASLSGAILL IIGTATGMAW GLTQSGFSRS LAAAMTGLPG GAVTFMAVSI VAFVVLGSVL
EGIPAIVLFG PLLFPIARAV GIHEVHYAMV VILAMGIGLF APPFGVGYYA ACAIGRVNPA
DGIRPILGYV LALFIGTIIV AAVPWISIGF LN
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