Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_3038 |
Symbol | |
ID | 7304129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 3129943 |
End bp | 3131886 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643600737 |
Product | type VI secretion protein, VC_A0110 family |
Protein accession | YP_002498282 |
Protein GI | 220922980 |
COG category | [S] Function unknown |
COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCGGG AATTCCTCGA CCTCTACAAC CGCGAACTCG GCGTCCTGAA CGAGGACGCG CGTGCCTTCG CGCAGGAATA TCCGGGCATC GCGGAACGCC TCGGCGGCCT CGTCGAGGAC CGCGCCGACC CGATGATCGC CGGCCTCCTC GAAGGCGCGG CGTTCCTGGC CGCGCGCGTG CAGCTCAAGC TCAAGCACGA ATTCCCCGAA TTCACCGCGA GCCTGCTCGA ACAGCTCGTG CCGCACTACC TCGCGCCGAC GCCCTCGGTG CTGCTCGCCC GAATCGGGGC GCCCTACGGC GACCCGGCCC TGCGCGCCGG GCGCCGGATC GCCCGCGGGG CGATCCTGGA TGCCGCCTAC AGCGAGCGCG AGCGCCGGGT CGCCTGCCGC TACCGCCTGA CGCGCGACGT GGTGCTGTGG CCCTTCGCGA TCACCGCCGC GGAGTACTGC GCGACCCCGG CGGGCTTGAG CGCGCTCGGC CTCCCGGTCG AGGCGGACGT CGCGGCGGGC CTGCGCCTGA CGCTGACGCA CCGCACCGCC GCCGATCCGG CGCAGGAGGA GGGCGCGGAC CCGGAGGCCG CCTCGATCGC GGGGTGCGCC GTCGACGACC TGCCGGTCCA CCTCGTCGGC CCGGAGGCGG ACGCGGTCGC GATCTACGAG GCGCTGTTCT CGGCCTCCGC GCGCGTCGCC TTCCGGGTGC TCGACGCCTT CGGGGACCCG GTCGTGGTGC CGGCGCCGCC CGGCTGCCTC GCGCCAGTCG GCTTCGAGCG CGAGGAGGCG CTGCTGCCGA ACGACCTGCG GGTCTTCGAG GGCTTTGATC TCCTGCGCGA GTACTTCATG TTCCCGCGCA AGTTCCTGGG CTTCCGCCTC ACCGGCCTGC GCGAGGTGCT GCCGCGGCTC ACGGCGCGCA GCGTCGACGT GATCGTGACC TTCCGGGAGT GCAATGCCCG CCTCGCCGCG GCCGTGCGGC CGGAGGCCTT CGCGCTCTAT GCGGCGCCGG CCGTCAACCT GTTCGAGATG ACGACGGACC GCGTGCCGGT GCGGGCCGGC GAGCACGAGC ACCACCTCGT GCCCGACCGC AGCCGCATGC TCGACTTCGA GCCGCACCGC GTGCTCGACG TCTACGCCCA CGTCGCGGGC CGGTCCGAGA AGCGCCGGGT CGAGCCGCTG CACGCGGCGC AGGGCGCCGC GCGGGCGACG GGCCCATCCT ATACTCTACG CCGCCTGCCG CGCCGCCGCT CGTCGGCAGA GCGGCAGGCG GCGCAGACCT CGGATTACTG CGGGACCGAG ATCTTCCTCA CCCTCGTCGA CTCGGCGCGC GAGGACGAGG AGCGCATCGC CGAACTCAGC GTGCGGGCGC TCTGCTCGAA CCGGCACCTG CCCGAGCACC TGCCGGTCGG GGCGGGCGGC ACCGACTTCC GCCTCGCGGA CGACGCCGAC CTGGAGGTGC TGTGCGTCGC CGGCCCGACG CGCCCGCGCG AGCCCGTGGT GGCGCAGATG CGCGGCCGGG CCGGGACCGC CTGGACCGGC GAGGTGGCGT GGCGCCTCGT GAACATGCTG AGCCTCAACC ACCTCGGGCT GGTGCGCCGC GGGGCGGGGG CGAGCGCCGA GGCGCTGCGG GAGATGCTGT CGCTCTTCGC CGACCTCTCC GACGCGGCGG TGGAGCGCCG CATCCGCGGC GTGCGCAGCG TCGACAGCCG CCCGGTGGTG CGGCGGCTGC GCCAGCGCCT CGGCACCGGC ACGGCGCGCG GCACCGAAGT GACCGTCACT CTCGACGAGC GCGCCTTCGA GGGCACCGGC GCCTTCCTGC TCGGCGCCGT GCTCGACCGC TTCTACGCCG AATATGCCGG GATCAACCAC TTCACCCAGA CCGTGATCCG CACGACGGAC CGCGGCGAGA TCATGCGCTG GCCGCCCCGG GCCGGCGCGA GGGCGCCGCT GTGA
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Protein sequence | MNREFLDLYN RELGVLNEDA RAFAQEYPGI AERLGGLVED RADPMIAGLL EGAAFLAARV QLKLKHEFPE FTASLLEQLV PHYLAPTPSV LLARIGAPYG DPALRAGRRI ARGAILDAAY SERERRVACR YRLTRDVVLW PFAITAAEYC ATPAGLSALG LPVEADVAAG LRLTLTHRTA ADPAQEEGAD PEAASIAGCA VDDLPVHLVG PEADAVAIYE ALFSASARVA FRVLDAFGDP VVVPAPPGCL APVGFEREEA LLPNDLRVFE GFDLLREYFM FPRKFLGFRL TGLREVLPRL TARSVDVIVT FRECNARLAA AVRPEAFALY AAPAVNLFEM TTDRVPVRAG EHEHHLVPDR SRMLDFEPHR VLDVYAHVAG RSEKRRVEPL HAAQGAARAT GPSYTLRRLP RRRSSAERQA AQTSDYCGTE IFLTLVDSAR EDEERIAELS VRALCSNRHL PEHLPVGAGG TDFRLADDAD LEVLCVAGPT RPREPVVAQM RGRAGTAWTG EVAWRLVNML SLNHLGLVRR GAGASAEALR EMLSLFADLS DAAVERRIRG VRSVDSRPVV RRLRQRLGTG TARGTEVTVT LDERAFEGTG AFLLGAVLDR FYAEYAGINH FTQTVIRTTD RGEIMRWPPR AGARAPL
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