| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_2897 |
|---|
| Symbol | |
|---|
| ID | 7304069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 2989340 |
|---|
| End bp | 2991517 |
|---|
| Gene Length | 2178 bp |
|---|
| Protein Length | 725 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643600605 |
|---|
| Product | polynucleotide phosphorylase/polyadenylase |
|---|
| Protein accession | YP_002498151 |
|---|
| Protein GI | 220922849 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
|---|
| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACG TACAACGCGA AGAATTGCTC TGGGGCGGAC GCAAGCTGGT GCTGGAGACC
GGCAAGGTCG CCCGGCAGGC CGACGGGGCC GTGGTCGCGA GCTACGGGGA GACCACCGTG
CTCGCCACCG TGGTGTCGCT CAAGGAGCCC AAGCCCGGCA TCGACTTCCT GCCGCTCACG
GTGAACTACC AGGAGCGGGC CTACGCCGCC GGCCGCATCC CGGGCGGCTA CTTCAAGCGC
GAGGGCCGTC CCTCCGAGAA GGAGACCCTG GTCTCCCGCC TGATCGACCG CCCGATCCGT
CCCCTCTTCG TCGAGGGCTG GCGCAACGAC ACCCAGGTCG TCGTCACCGT GCTCTCGCAC
GATCTTGAGA ACGACCCCGA CATCGTCTCG ATGGTGGCGG CCTCGGCCGC GCTCACCCTC
TCGGGCGTGC CCTTCATGGG CCCGATCGGC GCCGCCCGGG TCGGCTATGT CGGCAACCAG
TACAAGCTCA ACCCCACCAT CCAGGAGATG GAGGGCTCGA GCCTCGACCT CGTGGTGGCG
GGCACCGAGG CCGCCGTGCT GATGGTCGAG TCCGAGGCCA AGGAGCTGCC CGAGGACGTG
ATGCTCGGGG CCGTGATGTT CGGCCACAAG CACTTCCAGC CGGTCATCGA GGCGATCATC
CGGCTCGCCG AGAAGGCCGC CAAGGAGCCG CGCGACTTCC AGCCGACCGA CCTGTCCGAG
GTCGAGAAGG CGGTGCTGGA GATCGGCGAG GCGGATCTCC GCGAGGCCTA CAAGAAGACG
GTCAAGCAGG AGCGCTACGC CGCCGTCGAC GCCGTCAAGG CGAAGGTGAT GGCGGCGCTC
GCCCCCGAGG AGGGCGAGGC CAAGTTCGAG CCCGAGACGG TCAAGGCCGC CTTCAAGGAG
GTCCAGGCCA AGGTTGTGCG CTGGAACATC CTCGACACCG GCTCGCGCAT CGACGGCCGC
GACGTGCGCA CGGTGCGCCC GATCCTCTCC GAAGTCGGCG TGCTGCCGCG CGCCCACGGC
TCGGCCCTGT TCACCCGCGG CGAGACGCAG GCGCTGGTGG TGGCGACGCT CGGCACCGGC
GACGACGAGC AGTTCATCGA CGCGCTGGAG GGCACCTACA AGGAGACGTT CCTCCTCCAC
TACAACTTCC CGCCCTATTC GGTGGGCGAG ACGGGCCGCA TGGGCTCGCC GGGCCGGCGC
GAGATCGGCC ACGGCAAGCT GGCCTGGCGC GCAGTGCATC CGCTCCTGCC GGCGGCGCAC
GAGTTCCCCT ACACGATCCG CGTCGTGTCG GAGATCACCG AGTCGAACGG CTCCTCCTCC
ATGGCGACCG TCTGCGGCTC GTCGCTGGCG CTGATGGATG CGGGCGTGCC GTTGCGCCGT
CCGGTGGCGG GCATCGCCAT GGGCCTGATC CTGGAAGGCG AGCGCTTCGC GGTGCTCTCC
GACATCCTGG GCGACGAGGA CCACCTCGGC GACATGGACT TCAAGGTGGC CGGCACGTCC
GAGGGCGTCA CCTCGCTCCA GATGGACATC AAGATCGCCG GCATCACCGA GGAGATCATG
CGGGTCGCCC TCGATCAGGC GAAGGACGGC CGCGCCCACA TCCTCGGCGA GATGGCCAAG
GCCCTGACGG CGGCCCGGCC CGAACTCGGC GAGCATGCGC CGCGCATCGA GACCATGCAG
ATCCCGACCG ACAAGATCCG CGAGGTCATC GGCACCGGCG GCAAGGTCAT CCGCGAGATC
GTGGAGAAGA CCGGCGCCAA GATCGACATC CAGGATACCG GCGTCATCAA GATCGCCTCG
TCCGATGCCA AGGCCATCAA GGCGGCCTAC AACTGGATCC GCTCGATCGT GGCGGAGCCG
GAAGCGGGCA TGATCTACGA CGGCACGGTC GTGAAGACGA TGGAGTTCGG CGCCTTCATC
AACTTCTTCG GCGCCAAGGA CGGCCTCGTC CACATCTCGG AGCTCGCGCC CCAGCGCGTC
GCCAAGGTCA CCGACGTGGT GAAGGAGGGC GACAAGGTGA AGGTGAAGTT CCTCGGCCAG
GACGAGCGCG GCAAGATCCG CCTCTCGATG AAGGTCGTCG ACCAGCAGAC CGGCGAGGAC
ATTACCGAGA AGCTCAAGGC CGAGCGCGAG GCCGACCGCA ACCGCGAGCG GCAGGCGCGC
CAGAGCGCGG GCGAGTGA
|
|---|
| Protein sequence | MFDVQREELL WGGRKLVLET GKVARQADGA VVASYGETTV LATVVSLKEP KPGIDFLPLT
VNYQERAYAA GRIPGGYFKR EGRPSEKETL VSRLIDRPIR PLFVEGWRND TQVVVTVLSH
DLENDPDIVS MVAASAALTL SGVPFMGPIG AARVGYVGNQ YKLNPTIQEM EGSSLDLVVA
GTEAAVLMVE SEAKELPEDV MLGAVMFGHK HFQPVIEAII RLAEKAAKEP RDFQPTDLSE
VEKAVLEIGE ADLREAYKKT VKQERYAAVD AVKAKVMAAL APEEGEAKFE PETVKAAFKE
VQAKVVRWNI LDTGSRIDGR DVRTVRPILS EVGVLPRAHG SALFTRGETQ ALVVATLGTG
DDEQFIDALE GTYKETFLLH YNFPPYSVGE TGRMGSPGRR EIGHGKLAWR AVHPLLPAAH
EFPYTIRVVS EITESNGSSS MATVCGSSLA LMDAGVPLRR PVAGIAMGLI LEGERFAVLS
DILGDEDHLG DMDFKVAGTS EGVTSLQMDI KIAGITEEIM RVALDQAKDG RAHILGEMAK
ALTAARPELG EHAPRIETMQ IPTDKIREVI GTGGKVIREI VEKTGAKIDI QDTGVIKIAS
SDAKAIKAAY NWIRSIVAEP EAGMIYDGTV VKTMEFGAFI NFFGAKDGLV HISELAPQRV
AKVTDVVKEG DKVKVKFLGQ DERGKIRLSM KVVDQQTGED ITEKLKAERE ADRNRERQAR
QSAGE
|
|---|
| |