Gene Mnod_2830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_2830 
Symbol 
ID7303921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp2908227 
End bp2909675 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content68% 
IMG OID643600538 
Producttype II secretion system protein E 
Protein accessionYP_002498084 
Protein GI220922782 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGGCA GGAGACCCGG AGCGACGGCC CCCAAGCCTG CGGCTGCGCC GGCGGCCGTC 
CCCGCCCCTC TGACGGCGCC CATCCTTCAG GACACGAGCG CGCCGCGGAG CGAGGCGCCG
CGTGCGGCGC CGGTCGCGGT CGAGACGGCT CGCTCGGAGG AATATTACCG CACGAAGAGC
ATGATCTTCG GCGCGCTGAT CGAGGCGATC GACCTCGCGC AGCTCGCCCG GCTGGAGGCG
GAGGCCGCGC GCGAGGAGAT CCGCGACATC GTCACGGAGA TCATCGGCCT CAAGAGCGTG
GTGATGTCGA TCGCCGAGCA GGAGGACCTG CTCGACGACA TCTGCAACGA TGTCCTGGGC
TACGGCCCGC TCGAGCCGTT GCTCGGCCGC GACGACATCG CCGACGTGAT GGTGAACGGC
GCGAACCGCA CCTACATCGA GGTTTCCGGC AAGATCCAGC TGACGAATGT GCGCTTCCGC
GACAACCAGC AGCTGATGAA CATCTGCCAG CGCATCGTCA GCCAGGTCGG CCGCCGCGTC
GACGAATCCT CGCCGATCTG CGACGCGCGC CTGCCCGACG GCTCACGCGT CAACGTGATC
GCCCCGCCGC TGGCCATCGA CGGCCCCGCC CTCACCATCC GCAAGTTCAA GAAGGACAAG
CTCACCCTCG ATCAGCTCGT CCGCTTCGGC TCCATCTCGC CCGAAGGCGC GAAGATCCTC
CAGATCATCG GCCGCGTGAG GTGCAACGTG GTGGTGTCGG GGGGCACCGG CTCGGGCAAG
ACCACCCTTC TCAACTGCCT GACCCGCTAT ATCGACGACG ACGAGCGCAT CATCACCTGC
GAGGACGCGG CGGAGCTGCA GCTCCAGCAG CCCCATGTCG TGCGCCTGGA GACCCGTCCG
CCCAACCTCG AAGGGCAAGG CCAGGTCACC ATGCGCGACC TGATCAAGAA CTGCCTGCGT
ATGCGGCCCG AGCGGATCAT CGTCGGCGAG GTGCGCGGGC CCGAAGCCTT CGACCTGTTG
CAGGCGATGA ATACCGGCCA CGACGGCTCG ATGGGCACGC TGCACGCGAA CTCCCCGCGC
GAGTGCCTGT CGCGCATCGA ATCGATGATC TCGATGGGCG GCTACTCGCT GCCGTCCAGG
ACCATCCGCG AGATGATCGC GGGCTCCATC GACGTGATCG TCCAGGCGGC GCGCCTGCGC
GATGGCTCGC GCCGCATCAC CCACATCACC GAGGTGATGG GCATGGAGGG CGACGTCATC
ATCACCCAGG ACCTGTTCGT CTACGAGGTC ACGGGCGAGG ATGCGAACGG CAGGCTGACC
GGCCGGCATC GCTCGACCGG GATCGGCCGT CCGCGCTTCT GGGAGCGGGC ACGCTACTAC
GGGGAGGAGC GGGCGCTCGC GGCGGCGCTC GATGCGGCCG AGGTGGCGCG AGCGGGAGAG
GAGACATGA
 
Protein sequence
MFGRRPGATA PKPAAAPAAV PAPLTAPILQ DTSAPRSEAP RAAPVAVETA RSEEYYRTKS 
MIFGALIEAI DLAQLARLEA EAAREEIRDI VTEIIGLKSV VMSIAEQEDL LDDICNDVLG
YGPLEPLLGR DDIADVMVNG ANRTYIEVSG KIQLTNVRFR DNQQLMNICQ RIVSQVGRRV
DESSPICDAR LPDGSRVNVI APPLAIDGPA LTIRKFKKDK LTLDQLVRFG SISPEGAKIL
QIIGRVRCNV VVSGGTGSGK TTLLNCLTRY IDDDERIITC EDAAELQLQQ PHVVRLETRP
PNLEGQGQVT MRDLIKNCLR MRPERIIVGE VRGPEAFDLL QAMNTGHDGS MGTLHANSPR
ECLSRIESMI SMGGYSLPSR TIREMIAGSI DVIVQAARLR DGSRRITHIT EVMGMEGDVI
ITQDLFVYEV TGEDANGRLT GRHRSTGIGR PRFWERARYY GEERALAAAL DAAEVARAGE
ET