Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_1636 |
Symbol | |
ID | 7303397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 1724365 |
End bp | 1725720 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643599370 |
Product | Peptidoglycan-binding LysM |
Protein accession | YP_002496929 |
Protein GI | 220921628 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGCGG AGTTGCGGCG GGGCATCCTT CTCGCAGGCG TCGGGCTCGT AAGCGGCATC GTGCTCATCG GCGTGGTGAC GAGCGGCACG CGTCTCCTAT CCCGGGGGCC GCCCCCCGCG CCGTCCCAGA CCGTCGCGCC AAAGCCCACC GCGCCTGAGC CCGCCCCCGC GGTTCCGCAG GTGGCGGCGC TGCCCCCCAA TCCCGCAATG CCGGCCGAAG GGACCCGCGC ACCGAGCTTC GACGTGATCC GGGTCGAGCC GGGGGGCGAC AGCGTCGTGG CCGGCCGCGC CGCGCCGGGA ACCGAGGTCG AGCTCCTGCG CAACGGCGAG GTCTTCGCCC GCACCAAGAC GGACGCGTCG GGCCAGTTCG TCCTGCTGCC CCCTCCCCTG CCGCCCGGCA GCCAGGAGAT CAGCCTGCGC AGCGTCGCTC CGGACGGCAC CCGCATGGCG GGCCCCGAGA GCGCTGTGGT GGCGGTGTCG GCCGAGCGCA CGGGCAGGCC CCTGGTCGCC GTGACCGCGC CAGGCAGGCC GACGGCGGTG CTCTCGCAGC CCGACGCCGT GGAGCCATCC ACTGCCCCGC GGAGTCCGAA GGCTGCGCCC GCCGTCGCGG CCCAAACCCC GGCGCCCCCC GGCACGACGC CGATCCGCAT CGCGAGCGTC GATGCGGAGG CCGGCGGCAA GCTCTTCGTG AGCGCCCAGG GCGCACCGCA GGCCAGCGTG CGGCTCTATC TCAACGACAC GCTGATCGCG CCGGGCCAGG CGGGGCCCGA CGGCCGCATC GCCTTCGCGA TCGGGCGCGG CGTGCGCCCC GGCGACTACC GGGTGAGGAT CGATCAGGTG GATCCGGCCA CCGGCGCGGT GAAGACCCGT TCGGAGGTCA AGTTCGCGGT GCCGGCGACT CTCGATGCCC CGTCGGCGAC GGCAGCCGTG CGGCCGGCCC CGGGCGAAGC GCAGAAGCCT CCGCGGCCCA CAGCCTCCGC CAAGACGCCA GCCGAGCCGC CCGTGCTGCG TGAGGCATCG GCGGCTCCCG CGGCACCTCC CTCGACACCG ACCGTCGACG GAACCATCGC CCCCTCGGCA ACGAAGCCGG TCCCGCCCGC CGTCGCGGCG CGGACGCCCG ATCCGGCGCA GGACCCCGGC ACGGTGTTCG TGTCGGCCGT GAGCACAGCC ACAGTGGTGC GCGGGGACAA CCTCTGGAGC ATCAGCCGCA GGGCCTATGG GCGGGGCGTG CGCTACACGG TGATCTTCGG CGCCAACCAG ACCCAGATCC GCAACCCGAA CCGGATCTAT CCGGGCCAAG TCTTCGTGCT GCCGGGCGAG ACGCCGCCGG CCCCGGGGAC GCATAAGCGC GGGTGA
|
Protein sequence | MTAELRRGIL LAGVGLVSGI VLIGVVTSGT RLLSRGPPPA PSQTVAPKPT APEPAPAVPQ VAALPPNPAM PAEGTRAPSF DVIRVEPGGD SVVAGRAAPG TEVELLRNGE VFARTKTDAS GQFVLLPPPL PPGSQEISLR SVAPDGTRMA GPESAVVAVS AERTGRPLVA VTAPGRPTAV LSQPDAVEPS TAPRSPKAAP AVAAQTPAPP GTTPIRIASV DAEAGGKLFV SAQGAPQASV RLYLNDTLIA PGQAGPDGRI AFAIGRGVRP GDYRVRIDQV DPATGAVKTR SEVKFAVPAT LDAPSATAAV RPAPGEAQKP PRPTASAKTP AEPPVLREAS AAPAAPPSTP TVDGTIAPSA TKPVPPAVAA RTPDPAQDPG TVFVSAVSTA TVVRGDNLWS ISRRAYGRGV RYTVIFGANQ TQIRNPNRIY PGQVFVLPGE TPPAPGTHKR G
|
| |