Gene Mnod_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1358 
Symbol 
ID7308110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1442462 
End bp1443931 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content72% 
IMG OID643599099 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002496660 
Protein GI220921359 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.5787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCAC TCCCGACCAC CCGCCGCCCC TTCGTGATCG CGGCGGTGAT GGCCTCCATG 
TTCATGGTCG CCATCGAGGC CACCATCGTG TCGACCGCGA TGCCGCAGAT CGTCGGGCAG
CTCGGGGACC TGTCCCTCTA CAGCTGGGTG TTCTCGTCCT TCCTGCTCAC CCAGACCGCC
GCCACGGTGG TGTTCGGCAA GCTCTCCGAC GTCTACGGGC GCAAGCCCGT GATGCTCGCA
GGGATCGGCG TGTTCCTGGC GGCCTCCCTG CTGTGCGGCT TCGCCCGCTC GATGCCCGCG
ATGATCGTCT TCCGCCTGCT CCAGGGAATC GGCGCGGGGG CGATCCAGCC GATCTCCCTC
ACCATCGTGG GCGATCTCTA CAGCGCCGAG GAGCGCGGGC GCATCCAGGG CTTCCTGGCG
AGCGTCTGGG CGGTCTCGGC GGTGATCGGG CCGCTCGCGG GCGGCTTCAT CATCGAGCAC
GCCTCCTGGT CCTGGATCTT CTGGCTCAAC CTGCCGGTCG GGCTTCTCGC CGCCGCGGGC
TTCACCGTCT TCCTGCACGA GGGCGTCGCG CGGGAGCGCC GCCGCATCGA TGCGGCGGGC
GCCGCCCTGT TCACGGTGAC GATCGGCGCC CTGATGGTCG CGCTGACGGA GGCCGGCGCC
TCCGACGGCC GGGGCGCCGT GATGGCGGCT TGCGTGGCCG CCATCGGCGC GGTGCTGTTC
GTCGTGCAGG AGCGGCTGGC GCCGGAGCCG GTGATCGCCT TCTCGGTCTG GAGCCGCCGG
CCGATCGCGG CCTCGAACGG CTGCTCGCTG CTCGCCGGCA TGGCGCTGAT CGGGCTCACC
ACCTTCCTGC CGATGTACGT GCAGGGCGTG CTCGGGCAGA CGCCCCTGGT GGCCGGTCTC
GCCCTCACCG TCATGGTCCT CGGCTGGCCG ATCGGCGCGA CGCTCGCCGC CCGCAGCCTG
AAGCGATTCG GCCTGCGCCC GATCCTGCTC ACCGGGAGCC TGCTCCTGCC GCTCGGCGCG
AGCCTCCTGC TGACGCTGGG CCCCGGTTCA GCCTCGCTGG TGGCCGGGCT CGCCTCGCTG
GTGATGGGCT TCGGCATGGG GCTTCTCAGC ACCGCCGCCC TGGTGCTGAT CCAGGAGATC
GTGCCCTGGT CGCAGCGCGG CAGCGCCACC GCCTCGAACG TCTTCGCGCG CAATCTCGGC
AGCACGCTCG GCGCGACGGT CTTCGGTGCG GTGCTCAATC ACGGCCTCGG CCATGCCGGC
GCGGGCGTGA GCACCGACCA GCTCCAGCGG CTGCTCGCCA GCGGCGAGGC CGCCGCCGCG
GGCTTCGCGG AGATCCGCAC CGCCCTGCAG CAGGCGCTGC ACCTCACCTT CTGGGCGATG
TTCGCCATCG CGGTGGCGGG CGTCGTCCTG GCGAGCCTCG TCCCGCACGT GCCCCTCGGC
CGGGCGCGGG GAACGACGCC GGCGGAGTAG
 
Protein sequence
MSALPTTRRP FVIAAVMASM FMVAIEATIV STAMPQIVGQ LGDLSLYSWV FSSFLLTQTA 
ATVVFGKLSD VYGRKPVMLA GIGVFLAASL LCGFARSMPA MIVFRLLQGI GAGAIQPISL
TIVGDLYSAE ERGRIQGFLA SVWAVSAVIG PLAGGFIIEH ASWSWIFWLN LPVGLLAAAG
FTVFLHEGVA RERRRIDAAG AALFTVTIGA LMVALTEAGA SDGRGAVMAA CVAAIGAVLF
VVQERLAPEP VIAFSVWSRR PIAASNGCSL LAGMALIGLT TFLPMYVQGV LGQTPLVAGL
ALTVMVLGWP IGATLAARSL KRFGLRPILL TGSLLLPLGA SLLLTLGPGS ASLVAGLASL
VMGFGMGLLS TAALVLIQEI VPWSQRGSAT ASNVFARNLG STLGATVFGA VLNHGLGHAG
AGVSTDQLQR LLASGEAAAA GFAEIRTALQ QALHLTFWAM FAIAVAGVVL ASLVPHVPLG
RARGTTPAE